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Information for unigene UN31769
| FASTA Sequence |
| Unigene ID: UN31769 | Length: 1375 |
SSR | | GCCTTCATCTCAATTTAATTAACTTCTTCTCAATACACATGTTTCCTAGTATTCACCAAATATTTCTAGAAGCAGCCAGACTTAGA
AAACAAAAGAAACAAATTAAGTGGTAACTTAAAATTAGGGAACGCCGCTACATCCACTCACGGCAGGGACCGCATCTCCAGTTACC
CCGGGTGCAAGTAGATTCCTCCTCCCATGGAGAGCAGTGGGAGTGTATCGTGATATTACAAGTCTGGCATGTGAGATCAGCCCCTG
GTTCCACATGCATACATATCTGACATGGTTTTGTATTGTCATTTAGAAACGCTCTCCACTGTTCCATTGTCTCAACCTGAGGGTTT
GGGTTCTCCGTGTTTCCTGAAGCATCCTTGTTATAGCCATATCCATTGCACAGGTCGCTATCATCTGCTGTCAGCAACTCGGTCAG
CGAGAAATAGGTTTGGGGTTCGAATTCCATGTCTTGGTAGTCAAACGTTAGCTCCTCCCCTTTAACCATGTTGTTGTTGTTGTTGC
TGTCAGATGCATCCCAATCCATGACAGGCAATGTTGGTTCTGGTTTCACACAAGAAAGTGACTCGGGAGGCATTGAGAAGTCGATA
TAAGAAATGTTATTGTTCCCTTCTCTGTCTTCACGTTTGACTTGTCTCCTAACTGGTTCCGGGACAGAACCATCGACATTCCATTC
AACATCTAAATCTGAGGAACAAACGCATCTTCAAGGGGAAACGAGGGAGTAGAGGGTACCGAGTCTCTTGGTTCAGACATTATCTC
AGAATCAGAATCCATTCTGGTGTTATTGTTTCCTTTCTTATGTCTCTGGCGCTGGAAGAATGCATTTCTCTTTTGTCTCTCTTCCT
TGAGTTTGGGATCCATGAAAGGGCAATCTGGTACTCGTATACGACGGCACCTGCAACACTTGAATCCAGCAACTTCATGGATTTTT
GACTCTTCCAGCATAATCGCTTCAATGTGGTACCACTTGTCACAATTTGTACAGTGGATATACGTTTGGCCAGGATTATAGGGGAG
TTTGCATATCCAACAGACTGGTCCTGGATTCGGCTGATCAGATTGTGCAGCCAACACAACATTTTGATGTCTGAAGCTAGCACCTG
TGTCTTCCGAGTTCTTCTTCCTCCATATGACTCCCCAAGACAATGTCTTGTGTTGACTCTTTGGTGCCGTATTAGAATCAGGAGTG
ATTTGTTTAACTCCTGAAGACTTGTCTCGTGTGTTAGAAGATGGTAACTGTTGAATAAGAGGCTTAGTCTGTGTCTTAATGATTGG
AGTGACTGCGTTTTGATTTTGTCCATTGATCGTAACAGTGGGTGTTGTTGGATGTCTGTGATTGAAATTGATTAGTGAACGAGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002872016 PHD finger family protein [Arabidopsis lyrata subsp. lyrata] | 914 | 4e-096 |
| NP_197668 PHD finger family protein [Arabidopsis thaliana] | 900 | 2e-094 |
| BAB11682 unnamed protein product [Arabidopsis thaliana] | 865 | 2e-090 |
| BAA98208 unnamed protein product [Arabidopsis thaliana] | 695 | 1e-070 |
| NP_851094 DNA binding and zinc-finger domain-containing protein [Arabidopsis thaliana] | 695 | 1e-070 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FNI5 Gb|AAC80581.1 | 865 | 1e-090 |
| Q9LHR7 Genomic DNA, chromosome 5, TAC clone:K3D20 | 695 | 7e-071 |
| Q3E8P3 Putative uncharacterized protein At5g35210.1 | 632 | 1e-063 |
| B9SN69 DNA binding protein, putative | 381 | 2e-034 |
| B9HQK7 Predicted protein | 363 | 2e-032 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G22760.1 PHD finger family protein | 900 | 6e-097 |
| AT5G35210.1 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein | 632 | 8e-066 |
| AT5G35210.2 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein | 632 | 8e-066 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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