Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN31823

FASTA Sequence
Unigene ID: UN31823Length: 1011 SSR 
GCGGAAATAATAATTGGGGTTTATTTTACACTGGGGAATAATTGTTCTTCTTCATTAGCAGATCTGCTTCTTATAAGAAATAAATA
GTTTTTTTAAGTTTTTTTTTTAAGTTCCCAATTGCTCATCTTCGTTTTCTTTTGTTTTTCTAAAAAAGGATGATGGTGGTGAAGTA
GACGTGAAGAGTAGTACTGATGCATCGGGCAGGTAAGTGAATTCGATAATTATCAAGAATCTTTCTTCTACAGCCCCTTCTCATCT
CTATTACTTGTGGGTGTAATTACTTTTTTGGGGGTGTAACTACTAAACAGATACTATATAGTTTTTCACCATTTCAGAACCACAAA
GTTTTGTTATATGTGAATACGTTTTGGAGACGAGTGATCAAAGTTGGATCTAATCTAATCCCCCGAAGTTGGATCTAAATTCATTT
TCTTGTCGCTTAGTTTTATATTATCGTCATTATTCTCACACCTAAAACATTTGGGAATACAAAAGAGTAGTAGTTAGCGATGACGG
TGCACATTAGCATGGGATGCTCTTATACGAATGGTCCCCATATCGACCCTATTTTTATTGTGTGCACTCTATTTTTTATTTTTATT
GTGTGCACTCTATGTGTGCACTCTATTATTATCATTTATTCCTTGCACTCGTATATAGATCGCTTTCATCTCTTTATATTAAGTTT
TTTTTTCCTTTGTTTCAAACAGTCGCAGCAAGAACGTTAATCCCGCAGGAGAATCTGACTCTTCAACACAAGGTACACGTGAAATC
TTGATCGTTGTGGCGAAAATAAAGCTTTTCATGTTTTCTAATTAGTTATCTGTATGTGCAATATATAATAGTTGTCGAGAAGAATG
AAAAGGCTGTTACCTTGAGGAAGAGAAGAGGCTTTATAAGCTTTGAGGAACAAGAAGAGGATGAGGAGGAAGAAGAAGGAGAAGAA
GAAGCTAGTGGAGGCGGTGGTGGTAGTAAAGGGAAGAAGAAGAAGAAAGCCAAGAAGAGCGGTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM61307 unknown [Arabidopsis thaliana]1671e-009
NP_565964 uncharacterized protein [Arabidopsis thaliana]1671e-009
XP_002879964 hypothetical protein ARALYDRAFT_483290 [Arabidopsis lyrata subsp. lyrata]1661e-009

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
P93743 Expressed protein1677e-010
Q8LFN8 Putative uncharacterized protein1677e-010

Arabidopsis top hits (Blast detail)Scoree value
AT2G42040.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 154 Blast hits to 154 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).1674e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information