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Information for unigene UN31859
| FASTA Sequence |
| Unigene ID: UN31859 | Length: 739 |
SSR | | GGAGAATAATCATTTTGCTTTACAACAAAGCCAAAAAAAAAAGCTAATTGGGAGCTCTCCTCATCCACATTTTCTTCTCCCCAAGA
AATCAACTCGAAGGAATAGGGAAAATCCAGAATCATCATCATCATCGTCTTCTTTGACCGATCATAGGTGAGAGATCTTCTCAGCT
GTAAAACGGAGTCCCGATTGTTAGCTGATTCATCATCCTAGGTTTCGCCAACAGCAGCAACAGCCTCCGCCAACGCTAAGGGTGTT
TTTGTGATTGCGTAGCTCGATGGCGGGATTAGATAAACACGGAGAGAAGACGAAACCGTCCTCCTCCTCCTCCTTCTTCAACAGGT
CGCTCACAATTCACGGCCACAGACCAACCGATTCAACCCCCAAATCTCCCACCCTGAACCCTTCCCTGAACCGAACCACCTCCATA
ACCAAATTCTACAACCCCGTCGTCGAAACCTCCTCTCTCAAAGGCAAAGTCAAGAACCTCTGCAGACTATTCGAAGTCTCCAAATC
CTCCCCCAAACCTACCTCAACAGCATCACCCGATCCTCCTCCGAAGCACCAGAAATCAAACAAATCGGTTTTATCCGAATCGAGGT
TATCCCCGTTCCTCAGCCTAAACAACTCCGTGATCCGTCTCCCGGGGACAGAGGACAGGATCGTGGTGTACTTCACCAGCCTGAGA
GGGATCAGCGGACGTACGAGACTGCTACTCCGTGAGATGATCTTCAGGGGT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002871586 glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata] | 473 | 2e-045 |
| NP_196885 Glutaredoxin family protein [Arabidopsis thaliana] | 441 | 1e-041 |
| XP_002513069 electron transporter, putative [Ricinus communis] | 172 | 2e-010 |
| XP_002304790 hypothetical protein POPTRDRAFT_817620 [Populus trichocarpa] | 165 | 1e-009 |
| XP_002297745 hypothetical protein POPTRDRAFT_708496 [Populus trichocarpa] | 157 | 9e-009 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FFZ0 AT5g13810/MAC12_24 | 441 | 7e-042 |
| B9RGB7 Electron transporter, putative | 172 | 1e-010 |
| B9GWW6 Putative uncharacterized protein | 165 | 7e-010 |
| B9GM14 Putative uncharacterized protein | 157 | 6e-009 |
| Q0UMH1 Putative uncharacterized protein | 131 | 6e-006 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13810.1 glutaredoxin family protein | 441 | 5e-044 |
| AT4G22505.1 INVOLVED IN: lipid transport; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein and hydrophobic protein, helical (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22485.1). | 113 | 5e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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