 |
Information for unigene UN31881
| FASTA Sequence |
| Unigene ID: UN31881 | Length: 1082 |
SSR | | CTAACAAGAAAGTATCTCTACCGGACCAAGATCTTTGCCTTGATCCAGCATAATCATAGAGAAGAGAGAGACTGAAAAGTTTTCTT
ACAGAAGTAGTACTAGCTAACGATTCCAGTTTGAGAGATTATTACTATATTTAGCTGCAAACCGGACAAAGAACAAGACCATTCTC
GTTACACTTATTACATATGACCACTACAACGCCGCTTCCCCATCCTTCCACCACTTTGCAGCTTCCATTACAATCAGAACACGGCA
AGAACCTTAACCCACCGCATCCGTCGCAACCGCCGCCTCGATCTTTCTTCCTCGGAATCCCTCTGAGCAAATCTCCGAGCCTACCT
TCTTCCACCAATCTCATCACCTCCTCTGCTCCACCAACATACCTCCCCTTCACAAAAACCCTAGGCGGCAGCACAGGCTCTCCGTC
TCCCTCTCCGGCCATAAGACTCGCGAGCTCTTCTCTGAACCCTCTGTCCATGGAAACGTCCCTCTCGCAGACCACTACGCCGAAGC
TCTCTATCGCAGCTCTCACGGCGTTACACGCCTCGAATGTCCTCCTCACGCCGCGCAACGACGTCGTGTAGATCACAGCGCGGTTA
TTATCTACTCCGCCGCCACGTGGACACAGCTTCTCCGACTCCTCCTCCGCGAATCTCGGATCTAGCGGTTTCAGAACGTCTTCGTT
GTTGTTGGATTGGTTTCTAGGGCTTCTCCAGTTAGGATCCGAGTTCTCTTTGTTCACTCCGCCGGAGGAGACATTTCGTTTCACCG
GAAGAGGAGAGAACGCGTCGAGACCAGACATTAGCTCCCAGAAGTTAACAACCTCCGGCTCTGACTTGACGGTTATTGGATCCTTA
CCGACGAAGGTGAACCTCTCAGGCGGAGTCATGGGTGTTGCTGGTGCGGAGATAACGGAGGAGGAAGGAGGAGGAGGAGGAGGAGG
GTCGAGATTGAGAAGGCCGTAAGTGGAGGAAGTAAGCTGGACGAAGTGGTGGTGGCAGCCGGCGAGTTGAGAGAAGTCATCGCTTT
GATTCAGGGGTTGGGAGGAAGCGCAACCCATTGTCGGAGAAAGTTTGTTG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002891008 hypothetical protein ARALYDRAFT_473461 [Arabidopsis lyrata subsp. lyrata] | 1083 | 7e-116 |
| NP_174553 glutaredoxin-like protein [Arabidopsis thaliana] | 1041 | 5e-111 |
| XP_002518923 electron transporter, putative [Ricinus communis] | 715 | 3e-073 |
| NP_192801 Glutaredoxin family protein [Arabidopsis thaliana] | 685 | 1e-069 |
| XP_002874639 glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata] | 656 | 2e-066 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FLE8 Uncharacterized protein At5g39865 | 374 | 5e-035 |
| Q9LH89 Uncharacterized protein At3g28850 | 309 | 2e-027 |
| Q50H32 Glutaredoxin domain-containing cysteine-rich protein 1 | 245 | 5e-020 |
| A8MXD5 Glutaredoxin domain-containing cysteine-rich protein 1 | 239 | 2e-019 |
| Q9VNL4 Glutaredoxin domain-containing cysteine-rich protein CG31559 | 215 | 1e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LPI8 At1g32760 | 1041 | 4e-111 |
| B9RYV4 Electron transporter, putative | 715 | 2e-073 |
| Q9ZSB9 F3H7.9 protein | 685 | 7e-070 |
| Q1SN07 Thioredoxin fold | 585 | 3e-058 |
| A5BBG5 Putative uncharacterized protein | 564 | 8e-056 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
