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Information for unigene UN31927

FASTA Sequence
Unigene ID: UN31927Length: 1052 SSR 
AATCTGATCCGTCTTAGGTTATTAAAGATCAACACAAATACAAGCATAAAACATTTAAGTATGCAGACAAGATAAAGAAGGGTCGC
ATTGCACGCACACAAGTTATATCAAAAAAAGCATGTCTTCTCCTCAGAAAGAGATTTCTACTCCCTTGGTCTTGCTCTTCTTCTTC
TGATTTCCCTCCTTGGTCTTGCTCTTCTTCTTCTGATTTCCTTCCCTGGTCTTAGTCTTCTTCTTCTTCTTCGTCTCACTCTTTTT
CTGCTGTCTCTCAATAATGAAATATAGATTAGGATCATCTATCTGCTCCTGAGTGAAGGCGTTGAAGATACGTGGGGGAATGTAGC
CAGTCGGCTGTGGGTTGTATTCAATTGGCTCAACCTCAGTAACTACAAGACTCAAGCCTCCCACAGAACTTCCACTACGTTCCAGA
GCCTTGTCTACAGCCTCTTGACCACAGAGATAAATGTAAGATTTGATTTTGGTAGCAGCAGAAGAGGTTTTGTGGTGGTAAGCAAT
AGAACCATTTGCAGAGAAATATTCTTCTATCTCCTTCTCGACAACATCGAGAGGAAGGGAATTGTCATAACCCGCAACCATGGCCT
TGAATTGGTACATAATGAAATGATCATCTTTCATCGGGTCCAAGACATCATTAAGGTAAGTTTCGTGAAACGGGTAATTTGTAAAA
TCTGTCCTCCCATGTCACGTCCATCAAGCCTCAACGCCTTTTCTTCATCTTCTTCATTAAAATAAACGAAGGCGTATTTGCAGAGA
ATCGTCTCTTCATTGTTTCTGGGAATAGAAACATGAATTATTTTTCCACATGAAGCAAAATGTTTTCTCAAAGCCTCATCGACATC
CTCCATACGAAGCGAGGTGTCGTATCCTTCAACGGAAATTCTCCTAATGCTGCTTTTTCGAATCTCTGCATCACTACCGTCGTTCA
ATTCCAGACCCTACGTTACAAAAGAATCTAATCAGAGAATCCTACACTATAATTCAGAAAGCGATAAGGATCGAAGAAGAATTACC
TTCATGGCAGACTGCTGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893783 predicted protein [Arabidopsis lyrata subsp. lyrata]1957e-013
XP_002873093 predicted protein [Arabidopsis lyrata subsp. lyrata]1931e-012
XP_002873095 predicted protein [Arabidopsis lyrata subsp. lyrata]1893e-012
NP_001078524 RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]1804e-011
BAB09542 unnamed protein product [Arabidopsis thaliana]1742e-010

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q67YA0 Putative uncharacterized protein At5g035001802e-011
Q9FI06 Emb|CAB83308.11741e-010
Q9LZD9 Putative uncharacterized protein F12E4_2501722e-010
Q5BPG8 Putative uncharacterized protein1678e-010
Q5XUZ6 Putative uncharacterized protein1678e-010

Arabidopsis top hits (Blast detail)Scoree value
AT5G03495.1 nucleotide binding1801e-013
AT5G03480.1 nucleic acid binding / nucleotide binding1721e-012
AT5G53700.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: nucleic acid binding / nucleotide binding (TAIR:AT5G03480.1); Has 74 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).1674e-012
AT3G09160.1 RNA recognition motif (RRM)-containing protein1658e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

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