Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN32027

FASTA Sequence
Unigene ID: UN32027Length: 1156 SSR 
CAAACAAATGTTGTCCTGTAATTTTCTATGCTTCAGAAAAAAAACCAATAACCAAACCCTTTGTAGATATAAATCACTAAATAAAT
TTATTGACTAGAACAAAACAAAACTCAGCAATCATGACTTACAAAAGCGGAATGCAAAAGGAATTCGGAATCATCATCATCATCAT
CAGATTTATGACATCCCTGGTAGGTAAACACATTCTCAGACCACTCTATGAATCCTTGAATCGACTTGTAACCCCAAATCTTAATT
AGAATCTGTGCACACCAAATCTCAGTTTCACATTTCTCAGCATAATTAGTCTTCCACCAAACTAAAACTCTCTTGTCTTGCCCAGA
GTTCGTCACCGAAATCAGATAGTTAGAGGATATTGCTTCAAGTCCCGTAACTAAAGTCCACCAACATGAGCCATCGCAACGTAGTT
CACCATCTCGAACCACCAACCACAACTTTTTATCTGTTAGAAAGGACAAGGACGACTTGGTGGAACCGGAAAAATCTGTGGGTATA
CAGCACTTCGTGGAACTGTAACGACTTTTTCGATTAAGGAGATCGTTTTTTGTGGCAGTTGCGAACTCCCAAGTTTGAGTATTTGG
GTCGTAAACCTATCCATTATACTTAGAGTAGTTGCTGCTGCAGCCTCCAATCACATAGATCTTACCGTCCATCACCCTAGCGACTG
CTTCTTTTCGGAAAGACGCATGTTGGGGAGTTCACGCCACTGGTGAGTTTTACAGTCGATTAGAAACACTCTTTTGCTTCTTTCGA
GTCCACCGCCGATTACGTAGGTCTCAGACCCAGTTGAGACAAGACACGAGGAGTTGAGATGTCGGTAGGGAAACGAAGGGGTTGGT
ATCAACTTACGTTCGGAAAATGAACCATTTAGGGTTAGGGTTGTTTTTGTTGTTATTGAGGTTTAAGCAGACGTGGAGGTACTTCT
CGGGTCTTCCGATGAGTGATCGTGCGGCCTCGAGTTCAGGCGAAGACAGGAGTGAACGGAAACTCTTGGAGACAAGAGACAGAATT
GGATAATTGGTTCGAGAGATCCTAGCCAGAGTGTTGAAGACGATGTCGTGCGGTAACGACAAAAACGACGGAGGAGGCTCTGATGA
TGATGACTTCTTCGTCATCTTGTTTTGGTTAAGTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871005 kelch repeat-containing F-box family protein [Arabidopsis lyrata subsp. lyrata]4762e-045
NP_195918 putative F-box/kelch-repeat protein [Arabidopsis thaliana]4368e-041
XP_002871006 kelch repeat-containing F-box family protein [Arabidopsis lyrata subsp. lyrata]4287e-040
XP_002871008 hypothetical protein ARALYDRAFT_908166 [Arabidopsis lyrata subsp. lyrata]3212e-027
NP_195920 putative F-box/kelch-repeat protein [Arabidopsis thaliana]3141e-026

Swiss-Prot top hits (Blast detail)Scoree value
Q9LYY7 Putative F-box/kelch-repeat protein At5g029804364e-042
Q9LYY5 Putative F-box/kelch-repeat protein At5g030003145e-028
Q9LX87 Putative F-box/kelch-repeat protein At3g460503064e-027
O80573 Putative F-box/kelch-repeat protein At2g440302771e-023
Q9LYY3 F-box/kelch-repeat protein At5g030202545e-021

TrEMBL top hits (Blast detail)Scoree value
B9HFY5 Predicted protein2082e-014
Q6NL02 At5g395602036e-014
Q9FKA6 Emb|CAB79695.12036e-014
A0MFB6 Putative uncharacterized protein (Fragment)1822e-011
Q3ED92 Putative uncharacterized protein At1g19930.11768e-011

Arabidopsis top hits (Blast detail)Scoree value
AT5G02980.1 kelch repeat-containing F-box family protein4363e-043
AT5G03000.1 kelch repeat-containing F-box family protein3145e-029
AT3G46050.1 kelch repeat-containing F-box family protein3064e-028
AT2G44030.1 kelch repeat-containing F-box family protein2779e-025
AT5G03020.1 kelch repeat-containing F-box family protein2544e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information