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Information for unigene UN32034

FASTA Sequence
Unigene ID: UN32034Length: 1013 SSR 
AACCTGTTTTCTATAACAGCCATTAAATAAAATATTATCAAAACTGATCCCGTGAATTGAAGAACAGAGTAATACACAAAAAAGGA
ACAACAACAGAGAGAAAGAGAGAGAGCAGATAAGACTTATGACACTGTTGTTTTGACCTTCTTGTTCTTCTTCGAAGGAAGGTTGC
TGGAACTGACTTCTTCAGGTTTCCTCTTTTTACTTTCAAGAGTCTCATCCAAACTATTTTCGCCATCTTCATCAACTTCACCTATT
ATGCAGTCATCCAAACTAGTCTTTCCACCTTCATCAATTTCACCTATTGGATCATCTTCCGAGTCCGAATCAGATCCCCACCGGTC
TCCACCATCATCAAAGTCCCACCTCTCTCCATCTGGTGGCATCCAAAAGTCAAGCTCTCTCTCCTCAACATCTTCATCATTTCCAT
GTTCAGCTCCATCAGTAACATCCTCTCCACTCTCTTCCTTTTTATCTAACTCCTTGTTCTTCTTTTTTTCTTATCCTTCTTCTTCT
TCTTTTTGTTCTTCTTCTTCCCTTCCTTCACGCCATCCTCTTTCGCCACAGTTTCTCCACCTTCCTCAGGAACAATCCCAGATTCT
TTCTCTCATTCCTTCTCCTCTAGCTTGTTAAGGAAGCGGCGTCCATTGATATGCTTCCAAATATGCTCCTCAGTCTTGTTCACCGT
GTCACCCGTAAGCTTACACAGCAGCTTTGAACGAGAGCTAGGGTCTTTCTCAAACAAGTTAAGAGGGGGCTTGCTGTGGGACAAGG
CGTGGTCGATAAGCCCTAAACGGCACCGTTTGCACTCTGAATAGACCTTCTTGTCTTTCTCGAGGAGCTCGTGACCCGTTTGCACG
CATCTGAATCTCCCGTTCTCCAGCTTCTTATACTTTGGCTTCCCCAGTAGGTTGGCGCCTTCCTTCGTCGTCGTCGGCATCTCTTC
CTCTGTCGCCGCCATTGGTGTCGCGATTTGTGTTCGCTGAAAGGAGACTGCAAGTAGTTTGAATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873667 hypothetical protein ARALYDRAFT_488286 [Arabidopsis lyrata subsp. lyrata]7038e-072
NP_001031882 Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana]6761e-068
NP_196948 Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana]6761e-068
BAH19752 AT5G14440 [Arabidopsis thaliana]6284e-063
XP_002521492 conserved hypothetical protein [Ricinus communis]4895e-047

Swiss-Prot top hits (Blast detail)Scoree value
Q75JC9 Uncharacterized protein DDB_G02716701452e-008

TrEMBL top hits (Blast detail)Scoree value
Q6NPE4 At5g144406767e-069
Q9LY85 Putative uncharacterized protein At5g144406767e-069
B9DG85 AT5G14440 protein (Fragment)6283e-063
B9S673 Putative uncharacterized protein4893e-047
B9GIK4 Predicted protein4527e-043

Arabidopsis top hits (Blast detail)Scoree value
AT5G14440.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Surfeit locus 2 (InterPro:IPR008833); BEST Arabidopsis thaliana protein match is: surfeit locus protein 2 family protein / SURF2 family protein (TAIR:AT5G40570.1); Has 6533 Blast hits to 4299 proteins in 259 species: Archae - 4; Bacteria - 127; Metazoa - 2727; Fungi - 698; Plants - 260; Viruses - 77; Other Eukaryotes - 2640 (source: NCBI BLink).6764e-071
AT5G14440.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Surfeit locus 2 (InterPro:IPR008833); BEST Arabidopsis thaliana protein match is: surfeit locus protein 2 family protein / SURF2 family protein (TAIR:AT5G40570.1); Has 6513 Blast hits to 4273 proteins in 255 species: Archae - 4; Bacteria - 122; Metazoa - 2676; Fungi - 730; Plants - 236; Viruses - 90; Other Eukaryotes - 2655 (source: NCBI BLink).6764e-071
AT5G40570.1 surfeit locus protein 2 family protein / SURF2 family protein3834e-037
AT5G40570.2 surfeit locus protein 2 family protein / SURF2 family protein3655e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information