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Information for unigene UN32072
| FASTA Sequence |
| Unigene ID: UN32072 | Length: 1079 |
SSR | | AAACCCATCACGTTATACTTGCCTTGTTTGCAACACTAATAATTATTCCATTTTATGTTTGCCAAAATAAAATAAACATGTAGAAG
TGGAACTAAAAAACAAAATGAGGTATAGTACTAAGTATATTACTCCACCAAAAATTGTTTATGCTACAAGGTCATTCATGTATCTC
CTCTACCGGCTGGATCAGAGTCTGTGACCGGAGGAGGAGGAGGATTCCTCTGCTGGCGTTGAGAAGCTAAACGCCGTTCCAACGGA
GTCTTCCTCTTGCTGACAACAAACCTATTCACTCCTTTCCTCATTGGCATTATCGACGGGAATAGTATCTGCTGTTGTTGTTGTTT
CATTCGGCTGTTTGTGTTTGGCGAAATAGTCAGGTGGGAAAGGGACGAAAGGGACGAAGTCTGAGTCTTTTGTTTCGATGGAGATG
CGTCTCTTGTTTGCTGGAGAAGTCAGTGTACGGTATTTCTTCCTGCTCACAACAAACTGATTCTCTCCTTTCCGCATTAGCATTTT
CTCAGGAGACGTCTCTTCCTGTGGATCTGACACGCTGTGCAGTTCTGTGATCCTCTTTAACCATCTCGGAGATTTCTCCTCTGATT
CATTCTCATCTCTTTCAGGTTCATCTGCTTCTTTGCCAAAAACACTTGCACTTGACGTGTTCTCTTGATATTCGTCTGAGACACCG
GCCATTTGGTTGTTGGAGGTCATTGTTTCCTCCTTGTCGGACTTCTTGGCAAACATATCAGACGGTAGTGGCACGAACGGGACAAA
ATCAGAGTTAACTACCTGAGAAGACTCAAACCTCCTGGAAGAAACATTCTTACCATCAGAACGAGAAGCAAAAGAGGATGTAGAAC
CAAGAATCTCATTCAGGCTCCTATTCGTTTTAGTTCCATCTGCCTCAGCGTTAGACAACCTTCTCTCAAGAGGTGTCTTTCTCGTG
TTAACAACAAACCTGTTCACTCCTTTCCTCAAAGGCATAATCTCTGGAAAATCTTCATCTGTACTATCAACACTGTTTGCATCAGA
ACCACCCTGCGCTACTTTACTAAACCCCCTCTGTGCTTTCTCTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAL09834 ZnF_RBZ domain protein [Arabidopsis thaliana] | 803 | 2e-083 |
| XP_002873854 predicted protein [Arabidopsis lyrata subsp. lyrata] | 801 | 4e-083 |
| NP_197281 zinc finger protein VAR3 [Arabidopsis thaliana] | 796 | 1e-082 |
| AAL77653 AT5g17790/MVA3_140 [Arabidopsis thaliana] | 792 | 4e-082 |
| XP_002319199 predicted protein [Populus trichocarpa] | 476 | 2e-045 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8S9K3 Zinc finger protein VAR3, chloroplastic | 796 | 6e-084 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B9I657 Predicted protein (Fragment) | 476 | 1e-045 |
| B9NFU4 Predicted protein (Fragment) | 476 | 1e-045 |
| B9SY75 Putative uncharacterized protein | 217 | 1e-015 |
| C5XN72 Putative uncharacterized protein Sb03g037900 | 184 | 9e-012 |
| C0PGG7 Putative uncharacterized protein | 183 | 1e-011 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G17790.1 VAR3 (VARIEGATED 3); binding / zinc ion binding | 796 | 5e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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