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Information for unigene UN32117
| FASTA Sequence |
| Unigene ID: UN32117 | Length: 352 |
SSR | | ATTAAAGTTGCAGATTGATTAAAGATTTAGTGTTATAAATCAGAGAGAGAGAGTCAAGACTAGGAGTAATGAAACTGGTAGCAACA
ACTCAAAACTGATAACATTAAAACCAACTTAATGTTAAAACACAAACATGTATATATGTGGTAGGCTGAGACCAGTATATTGGAGT
ATCTAGTTCCTTCTAATGGTCTTTGACGGAACAAGTATTCCTCGCTTCTCCAAGCTCTTGAATCGATCTCTTGCTAGCGTGCAACA
TGCTATATATTATAGTTTGCACGAACACAAGTTAATAAAACGTTCTCTTTGTTTTATTAATCTTCCTTTGCTTTCTTACACTTTTC
TTTCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565931 uncharacterized protein [Arabidopsis thaliana] | 132 | 2e-006 |
| AAM64972 unknown [Arabidopsis thaliana] | 132 | 2e-006 |
| NP_001078030 uncharacterized protein [Arabidopsis thaliana] | 132 | 2e-006 |
| BAH19427 AT2G40430 [Arabidopsis thaliana] | 132 | 2e-006 |
| XP_002881721 hypothetical protein ARALYDRAFT_903334 [Arabidopsis lyrata subsp. lyrata] | 132 | 2e-006 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O22892 Uncharacterized protein At2g40430 | 132 | 7e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B9DFB0 AT2G40430 protein (Fragment) | 132 | 1e-006 |
| Q8LB48 Putative uncharacterized protein | 132 | 1e-006 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT2G40430.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tumor suppressor protein Gltscr2 (InterPro:IPR011211), P60-like (InterPro:IPR011687); Has 601 Blast hits to 544 proteins in 148 species: Archae - 0; Bacteria - 22; Metazoa - 201; Fungi - 103; Plants - 32; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink). | 132 | 5e-009 |
| AT2G40430.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tumor suppressor protein Gltscr2 (InterPro:IPR011211), P60-like (InterPro:IPR011687); Has 608 Blast hits to 551 proteins in 148 species: Archae - 0; Bacteria - 22; Metazoa - 203; Fungi - 106; Plants - 34; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink). | 132 | 5e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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