Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN32182

FASTA Sequence
Unigene ID: UN32182Length: 872 SSR 
TCCACTTTTGCAGAAAACAAAATCTGTTCTGAAACACCCCCAATAAAACCCTTTCTTTCTGTGCAGATTCGTACTTTCAAACATTC
TGCTACAAGTCTTTCCTCACAAAGCTTCTATTTTAGAAACAAATAATAAAATTGGAATTATTCTCTGAAAATTAGACACTAAAAGT
TAATAAACGTATGCTTCATCACCATCTTCATTTCCTTCATTACTCTGATAATTTAACCCACTCGTAGTGTCCTTCTAATAATGGCT
TCTCCTTCTCGAAATCAAAGTTATACTTCTTCTTGAATTTATCATGGACCTGTTTCTCAGCCACCACAAAAAACTCTTCAATCTCC
TCAGCCGTTGGTGGTTGCTCCGTCGTTGGTTTCCCCTTCTCCTCCGTCGTCGACAAAGATGTTCTCCGGCTGCAACAACAATCCGA
TGATTCTCTCACGGCGGAATCAAAACCAGCTACGGTTTGCTGTGAGTTCTCCATAGATTTGCTCGACTCTTTCTCTGTAAGGCTTT
CAAATAGCTTCCTCTTACTACTCCGTCGACACGACGACGTTTCGGTCTCACCATCTCTTTCCTCCTTCAGATCTATAACTCCATTG
TTGTTACTTGCGCAGTAAGAAGACGATGAGCTCTCCTTTTCCGATCGGTAAAAGATTCTACGGCTGCGAAGCTGCATATATGTAGA
CGAAGCTCCGACCGTCTCTTTAGCTTTTCTGCATTTTCTCACCATTGCGTGTTCGTGACGTTAATGTCTCCGAGAGAGAGAGAGAG
AGATGATTAGAGTTGAGAGGAAGAGGAAGACGAAAAACAGAAGCAAGAAGAAGAAGAAGGAGATGGTGGTGGAGTTTTGCTTTAAC
GGTCAGGATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880500 hypothetical protein ARALYDRAFT_481213 [Arabidopsis lyrata subsp. lyrata]4268e-040
NP_179924 cyclin-dependent kinase inhibitor 1 [Arabidopsis thaliana]3604e-032
AAM62967 cyclin-dependent kinase inhibitor protein [Arabidopsis thaliana]3604e-032
AAC49698 cyclin-dependent kinase inhibitor protein [Arabidopsis thaliana]3523e-031
BAD43255 cyclin-dependent kinase inhibitor protein [Arabidopsis thaliana]2143e-015

Swiss-Prot top hits (Blast detail)Scoree value
Q67Y93 Cyclin-dependent kinase inhibitor 13602e-033
Q9SCR2 Cyclin-dependent kinase inhibitor 21316e-007
Q9FKB5 Cyclin-dependent kinase inhibitor 31226e-006

TrEMBL top hits (Blast detail)Scoree value
Q8GUA2 Cyclin-dependent kinase inhibitor1684e-010
Q93V92 CDK/cyclin inhibitor1632e-009
Q93YF6 CDK/cyclin inhibitor1613e-009
Q9FS28 Cyclin dependent kinase inhibitor1462e-007
B9HHH7 Predicted protein1353e-006

Arabidopsis top hits (Blast detail)Scoree value
AT2G23430.1 ICK1; cyclin-dependent protein kinase inhibitor3601e-034
AT3G50630.1 KRP2 (KIP-RELATED PROTEIN 2); cyclin-dependent protein kinase inhibitor/ kinase inhibitor/ protein binding1315e-008
AT5G48820.1 ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE); cyclin binding / cyclin-dependent protein kinase inhibitor1226e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information