Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN32207

FASTA Sequence
Unigene ID: UN32207Length: 866 SSR 
ATGTACAATGGTGAGCCTTACTTTGTTAATATTTCATGGTATGTACAATGATAAACCCTCCATCAAACTCTCATCATAGTGACACA
ATCTAACAGCTATTCTTGCATTTTTTGGATATATAGATGCTGAGAAAACCTCAAGCAGAAGAGAAAAGCAAAAAAGACTTTACTTT
TAGCTTTTTTTTGATGGCTTCAGCTGTACCATCGATCCCAACTCTTCTTGTATAGTCTTCATACTTCATTGTTATAATCTTCCCCA
AAAACGGCTGACCATCACCCCCCGCTACATAACATGACACCATGTTCGAAGAGAATAGCCACCTTTAGAATAAATGAGGGGGAGCC
GGACGCTTATTTAGTTTCTCGACATCAACTTATGCGCCTCTAATGGAATCAGGAGAGGCAAACACACACACACACAAGCTCTGCGT
CTCGTTCTCAGCGTCCTGCGTCTGAGATCAGCCACACCTGAGTGCTTGGTTTCCGGATTGAAGTGTTTGGTTCACCTCTTCACTAC
CGTTGGGTCCATGATGGGGAACAAAATCCTAAAAAGCATCATCAGACACAACCCAAATCTGAGACACATCATCAACTCAAAAACAA
TACTTTCTCCAGCATCAAACAATCAAACTCGGTTCTAACTTCTCCTTTACCCCAACAACAAATAATCAAAGAGGGTTCAAAGTAAT
CAAACAAAGTTACTCTTCATCCGCGGCCTCGCGGCGGAGACCACGACGGAAGGTCTCCGATCGCTCTTCTCCGCCTACGGAGACTC
GACAAGGCGATCGTGGTCCTCGACAAGGTGACTGCGAAGTCGAAGGGGTACGGATTCGTTACGTTCCTCGGCCCAATGGCTAGACG
CCACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879492 hypothetical protein ARALYDRAFT_321151 [Arabidopsis lyrata subsp. lyrata]1732e-010
NP_973597 NUC173 domain-containing protein [Arabidopsis thaliana]1614e-009
AAC27411 nodulin-like protein [Arabidopsis thaliana]1614e-009
XP_002876942 hypothetical protein ARALYDRAFT_484361 [Arabidopsis lyrata subsp. lyrata]1516e-008
NP_189228 DNA-binding protein GT-1-related protein [Arabidopsis thaliana]1453e-007

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O80784 Nodulin-like protein1613e-009
Q9LU92 DNA-binding protein GT-11452e-007
A8IXS2 DNA binding protein GT-11353e-006
B9RMJ9 Transcription factor, putative1327e-006

Arabidopsis top hits (Blast detail)Scoree value
AT2G34357.1 binding1612e-011
AT3G25990.1 DNA-binding protein GT-1-related1451e-009
AT1G13450.2 DNA binding protein GT-11262e-007
AT1G13450.1 DNA binding protein GT-11253e-007
AT3G15010.1 RNA recognition motif (RRM)-containing protein1128e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information