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Information for unigene UN32233

FASTA Sequence
Unigene ID: UN32233Length: 716 SSR 
GGTTTAAAAATTTTAGTCTAAAATGAGACTAATATAGTTTGATGTCTTTTCACTTTTTGTTACATAGTTAAAACTTGACACAGAAT
ACTGAAAAAAACGCAGAGTACTGATCAGTAGCAATATCTAAAGAACAGATGCAAAGGTCTTATAGAGAATATTACAACAAAACCAA
ATACTAGGAAAAATGGAAGGCCACGATTAGTTGGCAATAGTAGTACTTTCCGATTCATCAATGTACCAAACCGAACCAAAACCGGA
ATTTATCCGCGCGTAATATTCGGCCGGTAAGAACCGGTCTCGACAATTCGGACATGTGATCTTGCGGCAGTCAACGATCCAACGGT
CCATGCAGCTATCGTGGAACACGTGTCGGCAGTTCGGAAGCTGTCTAACTTTATCATCGTATGCGAAGTTGGAGAGACAAACCGTA
CAGCAGTCGTCGAGATCGGTCTGAAGATCCGAGAAACGAACAACCGGGGAAACCTCGTAAGCGAGAGTCGTCGCCGTGTTGTCGGG
TACGATCGGGCCGGGTCGAGGAATGCCATCGTCTAAGAAATGGGGTAAACCGATGTAAGGACAGAGAGCGTCGATCATGTCTCTGA
AGAAACTAATGACGTAAAGTATCTTAAGTATGTAATCCGGAATCTCAAGCTCCTTTATATCCGTGGGGAGACCCATCGGAGAGAGA
GAGAGAGAATAGATAAAGCAAGAGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAC68670 RING-H2 finger protein RHA1b [Arabidopsis thaliana]5261e-051
NP_192875 E3 ubiquitin-protein ligase RHA1B [Arabidopsis thaliana]5181e-050
AAC68664 RING-H2 finger protein RHA1a [Arabidopsis thaliana]5072e-049
NP_192876 RING-H2 zinc finger protein RHA1a [Arabidopsis thaliana]5036e-049
XP_002872579 ring-H2 finger protein RHA1b [Arabidopsis lyrata subsp. lyrata]5036e-049

Swiss-Prot top hits (Blast detail)Scoree value
Q9SUS5 E3 ubiquitin-protein ligase RHA1B5185e-052
Q9SUS4 RING-H2 zinc finger protein RHA1a5033e-050
Q5XF85 RING-H2 finger protein ATL4J1521e-009
Q9SLC3 RING-H2 finger protein ATL2L1484e-009
Q8GW38 RING-H2 finger protein ATL1D1432e-008

TrEMBL top hits (Blast detail)Scoree value
Q4TU16 RING finger family protein (Fragment)4972e-048
Q9CAJ8 At1g63840/T12P18_142956e-025
B9RCF4 Zinc finger protein, putative2705e-022
Q3YIJ7 At1g63840 (Fragment)2661e-021
Q3YI75 At1g63840-like protein (Fragment)2633e-021

Arabidopsis top hits (Blast detail)Scoree value
AT4G11360.1 RHA1B; protein binding / zinc ion binding5185e-053
AT4G11370.1 RHA1A; protein binding / zinc ion binding5033e-051
AT1G63840.1 zinc finger (C3HC4-type RING finger) family protein2954e-027
AT3G61460.1 BRH1 (BRASSINOSTEROID-RESPONSIVE RING-H2); protein binding / zinc ion binding1825e-014
AT4G00305.1 zinc finger (C3HC4-type RING finger) family protein1602e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information