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Information for unigene UN32306
| FASTA Sequence |
| Unigene ID: UN32306 | Length: 878 |
SSR | | AGGACAATACTTTTTTGTATACAAAAAGAAATAAAATCTTATGTGTCTTTTAGGGTATAACGAGCAAAATCCAAATAAAGGAAACT
TAGACTTTCAAGTTTCAAGGGATAAAAATGTAACCTAGAAAAACAGAGAATACAGGGAGGTTTCACAACAGGTTTTGGAGTCTCTT
TCCTTCCTACTCCATGGCTCACAGCCTGCAAAAATGACAGTTCAGATATACAGTCACATATGAACTTTTTATTATCATGATATCTT
GCTTGAAAGAAACAATCAAATGGTAGTACAACAAAATACGATTAAAGATCCGCAAGGTAAATTTAGAACGACTACAAGGCAACCCT
CATGAACAATAAACTCATATACAAAGAAAGACTCCATGAATAACCGCAGAGAATGGATCCAGAACAAATAAAAACTCATCATAAAG
GGCAAATATACAATGAGACAGAACCATTGATTCAATGCAAGAAACATGACATGTCTATGCAGATACAATGATGCGAGATCCCATTT
ACAATATTGACTTATTATTATTATTAACTACTGTATGTCGCAAAATCATCAGAGGAGGAAAAGATAAGTGTAAAACCTCGTAAAAA
TATTTAGCCTAAGAAGATCCAACGATGATGTTGTTGATTGGGATGAAAACGAGCTTCACGAAGAACCCTACGAATCCCATCACCAC
AAATCCTATCGCCGTACGCACAGCCACCTTCGTGAATTCCTTGCGATCGGGTTTGTGACAGCGCTGGACGAGACGGATGCTGCTTT
TAGCGAAATCTCTGAGTGGATCGATGGCGGAATCAATAACGTCCATAGCTTCTCAGATCGAATTGGAAAAATTAGGGTTTCAGGAG
ATTTCGTTTTAGATGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566909 protein transport protein sec61 subunit gamma-3 [Arabidopsis thaliana] | 337 | 2e-029 |
| XP_002877618 hypothetical protein ARALYDRAFT_906104 [Arabidopsis lyrata subsp. lyrata] | 334 | 4e-029 |
| NP_194222 protein transport protein sec61 subunit gamma-1 [Arabidopsis thaliana] | 322 | 9e-028 |
| NP_001148682 protein transport protein SEC61 gamma subunit [Zea mays] | 319 | 2e-027 |
| NP_001147308 protein transport protein SEC61 gamma subunit [Zea mays] | 318 | 3e-027 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SMP2 Protein transport protein Sec61 subunit gamma-3 | 337 | 7e-031 |
| Q9SW34 Protein transport protein Sec61 subunit gamma-1 | 322 | 4e-029 |
| P38385 Protein transport protein Sec61 subunit gamma | 314 | 3e-028 |
| Q7Z1B8 Protein transport protein Sec61 subunit gamma | 254 | 3e-021 |
| Q8I7D9 Protein transport protein Sec61 subunit gamma | 249 | 1e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2HIR4 At3g48570 | 337 | 1e-029 |
| B6SPI4 Protein transport protein SEC61 gamma subunit | 319 | 1e-027 |
| C5Z769 Putative uncharacterized protein Sb10g026000 | 319 | 1e-027 |
| B6SPB6 Protein transport protein SEC61 gamma subunit | 318 | 2e-027 |
| B6TB44 Protein transport protein SEC61 gamma subunit | 315 | 4e-027 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G48570.1 protein transport protein SEC61 gamma subunit, putative | 338 | 5e-032 |
| AT4G24920.1 protein transport protein SEC61 gamma subunit, putative | 323 | 3e-030 |
| AT5G50460.1 protein transport protein SEC61 gamma subunit, putative | 323 | 3e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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