Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN32308

FASTA Sequence
Unigene ID: UN32308Length: 1021 SSR 
GACAAGCAATCTAACATAAACATAAAAATCCATGCAAAGTTGCTTTTTTTAAAACACAGTGATAATATCACAATCTATTTTCGAAT
ACTCCAATCCCAAAAACGACAAACAAATCTATACACATGCACACTTAAGACGCAACCCTGTTTTATTTACGGAAGCGGCCCTCAGT
CTGAGCATTCCTAAACGCACTACATGCAATAACATAGACCCAAATGAGAACAACGACGGTGATGATAAGTATGAGATTTGCTTTAC
GCCAATCTTTTCTAAGGTTTCCCAAAAGACCAGCTTTGCATGAGTTGCAATTGTAACAAAGCTGGCTTTGATCGTTGTTCCATAGG
TAACAATCTGCATCTGCAGCCATGTTGGTTGGGTTTAGCCAAAGTGTCGGATTGACGAAGTTGTAGCCACACACGGTTGGTGGTTT
GCAACAACCGGACTGGAGAGGAGTGATGGAAGAGGAAGAGAAGAACTGATCAGCAGTTATGAATTGTTGGCTGAGTTTAGGACAAA
CATTCGAATCAGCCAAACAGGCCCTGATCTTCCCCCAATCCCTGGAATCCACAACGTTCTCTCTCAGCCAATCCGAGAACCCTTCG
AGCCTGTACTCTTTGTAACCTCGACCCGGAACTTGATACGACCCGTCGGGCCGGGTCACGAAGAAAGCAAATATCAGAACCACCAG
CAGAAGCCCGATCAGTATCGCCATACAGCACAAGTACACAGCCAGCAGAGTCTCCTTGTCCTGGTAGGCGCCGATGAAGCCGCAAG
CAGAGACGAGGAGGATGAGAACGCCGAGGACGACGACGGGCCAGCGGAGGAGATTGACACACTCGCTGTCAGGCTTTGAGGCAAGC
CATATTCCTGACGCCGTTATAGGTATAGAACATAGCAACGCCAGTAAGTTCAGTATCGCCGTTAAGTTATTCGCTAGCGCCATTAA
CTCTCACTCTCTCTCTCTCTCTCTTGAAAAATTGAAGAAGAAGTAATAAAAGTGAGAGGACTGCTTTGGTGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179548 tetraspanin2 [Arabidopsis thaliana]13077e-142
XP_002883983 hypothetical protein ARALYDRAFT_899924 [Arabidopsis lyrata subsp. lyrata]13013e-141
XP_002308295 predicted protein [Populus trichocarpa]11042e-118
XP_002282397 PREDICTED: hypothetical protein [Vitis vinifera]10641e-113
NP_001057919 Os06g0572400 [Oryza sativa Japonica Group]8515e-089

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9ZUN5 At2g1958013075e-142
A9PAZ7 Predicted protein11042e-118
Q5Z619 Os06g0572400 protein8514e-089
A2YEA2 Putative uncharacterized protein8505e-089
A9NTX2 Putative uncharacterized protein8173e-085

Arabidopsis top hits (Blast detail)Scoree value
AT2G19580.1 TET2 (TETRASPANIN2)13073e-144
AT5G46700.1 TRN2 (TORNADO 2)7284e-077
AT3G45600.1 TET3 (TETRASPANIN3)6173e-064
AT2G23810.1 TET8 (TETRASPANIN8)6049e-063
AT5G60220.1 TET4 (TETRASPANIN4)5832e-060

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information