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Information for unigene UN32345

FASTA Sequence
Unigene ID: UN32345Length: 1156 SSR 
CCACAAAGATCATATATATTTATATTACTGAATGCAATAAAATTTTGCAACTTTTCTTACAAGACCAGCATCTCTAAGTACTTAAA
ATCTCCCCAATCTTTCACAATAAATCTTAACACCCCCCACCTATACCCAAAATTTTGGTAATCTCCTTGCATGATCTTATTCAATA
AGACTTATAATCCCATAAACATCCAACACTCAAAGACTTTTCATGTATATGGTGGATAGTATCCATACGGGTAACTAACAGAATGA
GCTCTGTGGTGAAGATTCTGTTGAGTATTATTATTAATACTATTATTTATCTGATCTTCAAACTCTTTAGGCTTAGCCGCACGCTT
GCTGCTCTTCTTTTCTTGGACCGCCCCAAAGACTACCTCATTAGTCTTCTCACTGTTCTGCTCATAATAAGTATGTGGGATCGACG
AGTAATGCCTTCTATGCTGCTGCTTCTGCTGTTGCTGCTTTTGCTGCTGCTGCTGCTGGTTTGGGAACTCAGCTGCTTCCCAGCTA
ATGTAGAAGGCACGGCTCTGACGCAGCTGCTGCATTTTCTCCGCGTCTTTGGACATGAAAGCATAAGTCTTCCTCGGTGTTTGGTT
CCTATGCTCAACAGGAGGAGGCTCATCTTCCTCAGGGATCACAAAGCTCTCTTGGATCGGCCACGGAGTTGTTGTTGTGCTAAACG
CAGCAGAAGAAGACTGCTTTGTTTGGTACTCCTGAAAGCTTGTTGCTGCTGTCTGCTGCTGCTTCTTTCTGAGCATCTCTGTAACG
GTAACCCAAGCGTTTGAAGCTAGGTTTCCCATAGATGCCAAGAAGCTTTCGTCTTGTTTCTCTAGCTGCTGCTCGTCATCTCCACT
TGGAATCAGAGACGGTCTGAATGCTTTCACAGGCTTCTGATCAGGATCTGCTTCGAACGTTTCAACGCTCACGTTTTGAGAAGAGA
CGATGGAACCGACCCGGCGCTGCAAGAGAGCCATCATGTAACCAAAGAAACCTGCAGCCACGAGGACAGCGACACCGAGAGGAAAC
CCGCTCTCGTACTGATAAGCACAGTCGTCGAAACGAAGCTGGATCTCTCTGATAGCTCTGTTGCCACGGTCAATGACGAGGAGGGA
ACAACTGCTTCCAACGTAAACAACATCAAAGTCATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177185 NHL domain-containing protein [Arabidopsis thaliana]11894e-128
NP_850974 NHL domain-containing protein [Arabidopsis thaliana]11894e-128
XP_002888763 NHL repeat-containing protein [Arabidopsis lyrata subsp. lyrata]11563e-124
AAC18814 Contains homology to serine/threonine protein kinase gb|X99618 from Mycobacterium tuberculosis. ESTs gb|F14403, gb|F14404, and gb|N96730 come from this gene [Arabidopsis thaliana]11439e-123
XP_002521024 conserved hypothetical protein [Ricinus communis]8086e-084

Swiss-Prot top hits (Blast detail)Scoree value
Q54I89 Regulator of nonsense transcripts 11282e-006
Q54WV0 Nuclear transcription factor Y subunit beta1254e-006

TrEMBL top hits (Blast detail)Scoree value
Q8W4B0 Putative uncharacterized protein At1g7028011893e-128
O64609 F17O7.19 protein11436e-123
B9S4L8 Putative uncharacterized protein8084e-084
B9HVA9 Predicted protein7905e-082
Q8S9K1 At1g23880/T23E23_86769e-069

Arabidopsis top hits (Blast detail)Scoree value
AT1G70280.1 NHL repeat-containing protein11892e-130
AT1G70280.2 NHL repeat-containing protein11892e-130
AT1G23880.1 NHL repeat-containing protein7724e-082
AT5G14890.1 NHL repeat-containing protein3485e-033
AT3G14860.1 NHL repeat-containing protein1792e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

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