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Information for unigene UN32373
| FASTA Sequence |
| Unigene ID: UN32373 | Length: 914 |
SSR | | GCACTAAGAAGACAACTTTAATAATCGACTTTTATGAAATTGAATGTTTCTGAAGAAAGGTTCCAAAGAAAAAGGATGAAAAACCG
ACCAAGAAAACTGAAAACCAATACGACTTTGCCACATAAAACTCAAGTAGAAAAGGCAGACAAAAAAAAGAATAGAGAAAGGATGC
AAAACAAAAATTTAAAACTATTCTCCCTTATGGAGGAGCCGTTAGAGATATGCAAAGAAGTTAAGAAGAAGCACCACCGCGAGGAC
CACCACGTCCTCCTCCTCCGCCTCCTCTACCACTCCCTCCGTTTTGAGGAACCCTTTGGTAACCTTCTCCACTGTTCCGAGTGTTT
GAACTCCTTGGCCTACTGGAATATTCACCTCTTCCATAGCCTCCTCTTCCTCCTCCACCACCACGTCCCCCTTTGAAACTCTCGTT
TCTGAAGCTTCCTCTTCCCCCAAAGTACCTACCCCTTCCACCTCCATTGTTGCCTCCTCCTCGACTGTTAGTTTTCTTCTCCTCTA
AAACAGCTTGACGATCACCAATTGTAACCGGTGAGGCCTCGAGAGCACTCTGCTTCCCGCTAGAGGTTTCGAACTCCACAAAACCA
AAATAGAAACCTTGCTTATTGCTTCTGACTTGAATCCCCTCGTGCTTGATAGCACCAAAGCTCTTGAACACCTCTTCAAGTTGTGT
TGGTGTAGTGTCGAAAGGTAAGTTTCGAACATATATCGAATGACCATCATCTTCCACATCAACATTGCTACTGTTTGCAACATTCT
CGGGCGCTGCTGCTGCTGCAGGCTCAGCAGGAGGAGCAGTTGGCTTGGGTTTGGTACTGACAGGAGCTGCTGCTGCTGCTCTTGGC
TTGTTCCGAGCAGCTTGTGTTGGTGCTGGACCGCTTTTCATCAGTTTCAGGATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_851235 nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] | 926 | 9e-098 |
| AAM62628 ras-GTPase-activating protein SH3-domain binding protein-like [Arabidopsis thaliana] | 926 | 9e-098 |
| XP_002864713 nuclear transport factor 2 family protein [Arabidopsis lyrata subsp. lyrata] | 924 | 2e-097 |
| NP_200906 nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] | 914 | 2e-096 |
| XP_002514643 RNA binding protein, putative [Ricinus communis] | 493 | 1e-047 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q03251 Glycine-rich RNA-binding protein 8 | 183 | 6e-013 |
| Q8I1F4 rRNA 2'-O-methyltransferase fibrillarin | 169 | 2e-011 |
| P27484 Glycine-rich protein 2 | 168 | 3e-011 |
| Q9W1V3 rRNA 2'-O-methyltransferase fibrillarin | 162 | 2e-010 |
| P04264 Keratin, type II cytoskeletal 1 | 162 | 2e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LEI7 Ras-GTPase-activating protein SH3-domain binding protein-like | 926 | 6e-098 |
| Q9FME2 AT5g60980/MSL3_100 | 914 | 2e-096 |
| B9RLM4 RNA binding protein, putative | 493 | 1e-047 |
| B8LK80 Putative uncharacterized protein | 464 | 2e-044 |
| B6TQ25 RNA-binding protein-like | 430 | 2e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G60980.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | 927 | 3e-100 |
| AT5G60980.2 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | 915 | 7e-099 |
| AT3G25150.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | 339 | 4e-032 |
| AT1G13730.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | 272 | 2e-024 |
| AT2G03640.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | 257 | 1e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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