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Information for unigene UN32404

FASTA Sequence
Unigene ID: UN32404Length: 1159 SSR 
TATATTATTGATCAAATTACAATAATTGTGAAAAATGTAGCAACTTAAAGCTGACAATAAAAAATTACCCAAGGAGAATAAGAGCT
CATCTCCTTTTCTTTACCTAGAGAAGTAATAAATTAGAATGGTAATAAAGTAGACTAGTTAGAGATTTTTTATTTGAGATAAGATA
TAGCTCCTCAGGCTCTTGGGCTTAGGGAGGACAAAGTGATGTCCTGAAAAACCTTGAGCCTCTTCTTGTCCACCACTTTGGTCTCT
GTCCCCAAAACAGCCATGATCATTGCTTCTTCAAACTCCTTGTTGTCTGGTAATCCACAGTCTATTGCTTTTTTCTCCATTGACAA
TCTCCTCTTCGTGTTTGTCTCTCCCTCACCACCACCACCACAGCTCAACAACATCCCCATCGTTTGGCTAGACGATCTCGTCCTCT
TCAGCTTCTCGTTATTGCTCACCAACTTCGAAGAGAAGAACGGTTTTGCATCCACCCTTAATGGGTTATTTGCTGCTACTACATTC
ACATTCACATTCGTCTTCACGTTCTCGTCACCGTACCCATCATTGCTCAAATCCTGCTTCGGTTTAGCCGCCTTCACGCTCTGTTC
TCTACAAGGCTGAGGCTGCCATACAGAGGAAGAACCAAACATTGCGTCGAAAAGCCTCCTCTGCTCAACCCTATCACCCCCACCTC
TTCTCATCGTCTCGGATCCAAGATCACTAAGCATCTGCTGCGCTCTCTCGTAAGCTTTTAGATGCGAATCAACTCCTCTAGGACCA
TCCACGACCGCCGGCTTCACGCGTCGTAACGTCTCCTTGGCTTCGTCGATCCTTCCTTGCTTCATAAGACAGATTCCGAGGTTACA
CATCTTGTTGCTGTCAGGTGCGATCGATAGAGATCTCCTGTACGCATCCTCGGCTTCCACGAAGTTGTCTCTTTGCATCAGAGCCC
ATCCTAAGTTCCCCAGTAGCCGCGTGGCTTCTTGCTCCACTGAGACTTGGAACTTCTTCCCCTGAGACCTAGCGGTTTTGGTTCGT
TTCCCGTTAAAGGCGAGACCTTTCTGTATCAACAAGAGTTTGTGTTTCAGTAGTGCAATCTGGTCGTCTAATCTCCCGCATCTCTT
GTAGAGATCTAAGAGGATGTTGTCAAGAGATTCCTGGGCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_190696 tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]13661e-148
XP_002876079 hypothetical protein ARALYDRAFT_485479 [Arabidopsis lyrata subsp. lyrata]13311e-144
AAC72542 MS5-like protein [Arabidopsis thaliana]12064e-130
XP_002529643 conserved hypothetical protein [Ricinus communis]8732e-091
XP_002327655 predicted protein [Populus trichocarpa]8652e-090

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SD20 At3g5128013668e-149
Q9ZTU4 MS5-like protein (Fragment)12063e-130
B9SUH4 Putative uncharacterized protein8731e-091
B9MXE7 Predicted protein8651e-090
A5AL65 Putative uncharacterized protein8391e-087

Arabidopsis top hits (Blast detail)Scoree value
AT3G51280.1 male sterility MS5, putative13665e-151
AT5G48850.1 ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1); binding4077e-040
AT1G04770.1 male sterility MS5 family protein4042e-039
AT5G44330.1 male sterility MS5 family protein2885e-026
AT4G20900.1 MS5 (MALE-STERILE 5)2241e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information