RadishBase

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Information for unigene UN32411

FASTA Sequence

Unigene ID: UN32411	Length: 959	SSR
CTTCTGTTGAGAGCTTTTTCTCTGTATGAATTAAGAGTTTTCAAAAGTAAAAGTTTAATTTCTCAAAAGAAAAAAAGGGTGCAAAA TTTTCACCATCTTATATAATAGTATCAAACAACAGTTGCTCTGTTTTCTTTCACCATTGCTTCTTTCCCTTTTTCTTCTTCTTGCT GCTGCTGCTGCTACTACTAGTACTACTGGCAGCTGCAGAAGTAGGGCTCTCGGCGGCACTATCAAACATACCGGCTTGTGCGGCGT TCTGCAACCACTCGTAAAACTCTTCCTCTGTCATTGCCTAATCCATGTTCGCATTTGGCATTCTATGGTTTCCTCTTTGCCCTGAT GAACCACTTGTTCCTCGTTTTGCACCTGTCACGTTTGTGTTCACATGGAAACTCGGCTTGTGGGTGTTCGCAGGACATCTCATTCC CTGACAGATATACCACTCAGAAGCTTCATGTACTTTGCTGTCTGCACACACGTAAGCACGCGGCAGATCAACCTTTTGAATCAACC CGAACAAGACGTGCTGTGAAGATTGTTCAACCCAACCGTCTCCATCTTTTGCTTGGTGAAAGTCCTTACAATCCTGGCACCATCTT GCTCTAGATTTTGATTTCTTTGTTAGAAACCAGGCATGGAGATTGCCACATTTTTACACGCTATTTGTCTACACTCTCTTAAAGCT TCCTCTCCTTCACCTTCTGAGCTTCCAAAACCCTGTCCCCGAGTGTCCCTTTGAGAAGAATTCTGAAACCTTCGGAAGTAGTTGAG TATTTCTTCTCTCTTTAGTTCATCGTCATATGATTTTCGTTTTATAGAATCGAGCAACACCTCATAGGCATTCTGAAGTTTCTTAA AAGCTTCGGCTGCTTTCTCATTCCCCATATTCTTATCAGGATGTACCAGCATCGCCTTCTTCCTATATTCTCGCTTGATATAAGCC ACGTCAACGTTCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_199769 chaperone DnaJ-domain containing protein [Arabidopsis thaliana]	803	2e-083
XP_002519271 conserved hypothetical protein [Ricinus communis]	614	1e-061
XP_002280185 PREDICTED: hypothetical protein [Vitis vinifera]	609	6e-061
XP_002316054 predicted protein [Populus trichocarpa]	598	1e-059
CBI22848 unnamed protein product [Vitis vinifera]	595	2e-059

Swiss-Prot top hits (Blast detail)	Score	e value
B1ZUS0 Chaperone protein dnaJ	149	5e-009
Q182E7 Chaperone protein dnaJ	147	9e-009
Q2GLU9 Chaperone protein dnaJ	145	2e-008
Q2GI75 Chaperone protein dnaJ	145	2e-008
Q0AIY0 Chaperone protein dnaJ	145	2e-008

TrEMBL top hits (Blast detail)	Score	e value
Q9FGY8 Similarity to unknown protein	803	1e-083
B9RZV2 Putative uncharacterized protein	614	1e-061
B9HX53 Predicted protein (Fragment)	598	7e-060
A2XNQ1 Putative uncharacterized protein	585	2e-058
Q0DM19 Os03g0832900 protein	585	2e-058

Arabidopsis top hits (Blast detail)	Score	e value
AT5G49580.1 DNAJ heat shock N-terminal domain-containing protein	820	7e-088
AT1G16680.1 DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative	371	9e-036
AT1G79030.1 DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative	216	8e-018
AT3G62600.1 ATERDJ3B; heat shock protein binding / unfolded protein binding	140	5e-009
AT2G20560.1 DNAJ heat shock family protein	123	5e-007

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


11	2			100%

Unigene Members	Member information