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Information for unigene UN32503
| FASTA Sequence |
| Unigene ID: UN32503 | Length: 1171 |
SSR | | AGCTTGGAATCTTAAATGTAAGATAGTTTATGTAAAATTGGAGTCCATGAAACTACTTATTGACTCTGCACTCTACATTCATCTTG
CATTATTGTTTCTACAAGTTTCTCTCTCTCTCTCTATGATCTGTTTTTTTTTTTTCTTGAGGATTTGTCATTCATATATTGCCTTC
ATGGTTGCTTCATGATTCCCACTGTTTGTCCATCCTTGTTGCACTTGAATTGTATACTGCAGATTCCAAACAACATCTTCAATCGA
TGGTCGCTTGCTCTGATCTTCACAAAGACAGTTGATAGCAAATTCCACTGTTGTCCTCAACGGCTCATAAGCATATGATCCTCTAA
CAGTTGGATCTGCTAAGCTGCTCAATACGGACGGTTCATCTCTCAAACCATTTTCTAGCTGAAGCTTCAGACTTCCCATCTCTGAA
GAGCCTGCAGATACTACCCTCCCTGTGATGACCTGAAGCAGTATCACTCCAAACTGGTACACATCTTCTTTCTCTCCATCCTCATT
ACTCCGGGGAGTTTTGACTTGATGGCTCTCTGCTCCAACCTGGGATGGTAAAGGAATAGTGTAGCCACTGATTTTTACAGTGAGTG
TTCCATCAAGCAGAATATTCTCTATATCCAAATTGTTCCCAAAGATTCCTGGTGCTACTCCCATGTGCAAGAACTGTATCCCTCTA
GCGACTCCTATGGCTATCGCCATTCTTTGAGGCCATTTCATCACCTCTTTCCTCCTACAATCTGTGAGAAAGTCCTTCAACGACCC
GTTTGAGATATACTCTTGGACAATGAAGATGGTGTGTCCAGCGTGTTGGTTGTGGCCTTGGTTACTAGCAATGCAATGTCCAAGAA
CACTAACCAAATGCATGTGCCTTAGCTTTGATAAAACCTCCATCTGCTGGGCTAAGCTTTGTGGTAAATTCTTCTGTTTCAGCTTG
ATACATCTCACTGTCACTGCTATGCCTTCTCTGAGACTACCTCTGTACAACTGCTCGCAGAGAAGACTTGCTGCATCAAAGTCGTT
AGTCGCTTCTTCCAGTTCCTCCAAGGAGAAAATGTGGTACGGTGGCAGACCAATCACTGCAGATCTCATTGTCTGCGGTACTCGTC
TTGAATCTGGTAATGACTTAGTGCTGGTGGTTGTGTTGCTGCAAATTGAGACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_178381 leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] | 1539 | 1e-168 |
| XP_002876828 hypothetical protein ARALYDRAFT_322589 [Arabidopsis lyrata subsp. lyrata] | 1453 | 1e-158 |
| Q9M9S4 RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g14390; Flags: Precursor | 1355 | 2e-147 |
| NP_172891 putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] | 1324 | 9e-144 |
| XP_002890053 hypothetical protein ARALYDRAFT_471612 [Arabidopsis lyrata subsp. lyrata] | 1314 | 1e-142 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| C0LGJ9 Probable LRR receptor-like serine/threonine-protein kinase At2g02780 | 1539 | 5e-170 |
| Q9M9S4 Probable LRR receptor-like serine/threonine-protein kinase At1g14390 | 1355 | 1e-148 |
| C0LGL4 Probable LRR receptor-like serine/threonine-protein kinase At2g28960 | 274 | 2e-023 |
| O81069 Probable leucine-rich repeat receptor-like protein kinase At2g28990 | 269 | 9e-023 |
| C0LGG3 Probable LRR receptor-like serine/threonine-protein kinase At1g51820 | 267 | 1e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9MTX3 Predicted protein | 1017 | 3e-108 |
| B9S2A4 Serine/threonine-protein kinase PBS1, putative | 932 | 2e-098 |
| Q8LFN2 Leucine-rich repeat receptor-like protein kinase | 690 | 2e-070 |
| Q2HVC0 Protein kinase | 668 | 7e-068 |
| Q9SRV4 F20H23.20 protein | 661 | 5e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G02780.1 leucine-rich repeat transmembrane protein kinase, putative | 1470 | 4e-163 |
| AT1G14390.1 leucine-rich repeat transmembrane protein kinase, putative | 1324 | 4e-146 |
| AT3G03770.1 leucine-rich repeat transmembrane protein kinase, putative | 690 | 1e-072 |
| AT5G14210.1 leucine-rich repeat transmembrane protein kinase, putative | 375 | 4e-036 |
| AT3G46410.1 protein kinase family protein | 282 | 2e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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