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Information for unigene UN32518
| FASTA Sequence |
| Unigene ID: UN32518 | Length: 994 |
SSR | | GCACTGAATTTATTTTTCATAGCTTTTATCAAATTTTTACATTATGATAGGACAATAACTCTTTGCTTGTTAGTTTTATCGACTGC
TGAACAACACACTTATTGACATGTTGTTAGAGCAACATGTGATATGAAGGCGAATACTCTCCTTCATCTTCTGCTGCTATGTATCG
TTTTGATTTAATTTGAAGGTATTCAGATGCTTCTACGTAGCTACACACCTCTCGGATACCATTATTACCTTGTGATGCATCGAGCC
TCTGCAATGTACTTATCCAGGTCTCTTCGTCCTTGCCACTTAAGAACGAACCGAGTAGCTTGAGGGCCAGAGGAAGATGCCCTGCT
AAACAGACTGCGCGTACCGTCAACTGCTCGAAACCAACACGAGGGTAATCCTGCCTGAAAGCGAACTGAGAGAAGATGCGAAGAGC
TTCATCGTATCTCAAGAAACCCATCTCGTAAACATGTTTCACCCCGCATGAGACGAGTGAGCTCTTGTCTTTGGATGTCATGATAA
CTCTACTTCCGGGACTAAGCCAATGCGAGACCTCCACGATATCCTTGAGCTGTTCACCGTCACAGACGTCATCAACGACAAGCAGG
ATGTTTCGGTTCATAAGACTTGGTTTGATGTCATCAAAGCTGTCTCTGGAACCCCTTGTCCGGGTGAGATGGTCTAGTAAACTTGG
AGAAATGCGGTTTTGATGACTGTTTAAGAAGCAGTGGTGTTGAAAGTGTTTTGAGATGTCCTCAAAAACACATTCAGCTAGAGTCG
TTTTACCTACTCCTTCCATACCACAAATGCCGATGGTACGTACTTGGTGGTTTGCAGAATCCAAATCCAACAATCCATAGACTGCT
TTCTTGTGACGGTCCATACCTAAAAGAAGGTTGTGATCCTGTGATGATGATGATGATGCAGAGGGCATATTTATAGTGACAACAGA
TGGAGCATCTTTGGTTACATACTCCCGGAAAAGATATTCTCTCATTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_173204 Disease resistance protein (TIR-NBS class) [Arabidopsis thaliana] | 523 | 5e-051 |
| XP_002868674 hypothetical protein ARALYDRAFT_493978 [Arabidopsis lyrata subsp. lyrata] | 522 | 7e-051 |
| NP_198825 TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 520 | 1e-050 |
| AAY56443 At5g40090 [Arabidopsis thaliana] | 520 | 1e-050 |
| AAF79471 F1L3.31 [Arabidopsis thaliana] | 515 | 5e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82500 Putative disease resistance protein At4g11170 | 255 | 3e-021 |
| Q9FL92 Probable WRKY transcription factor 16 | 253 | 5e-021 |
| Q9FH83 Probable WRKY transcription factor 52 | 250 | 1e-020 |
| Q40392 TMV resistance protein N | 182 | 8e-013 |
| Q9SZ67 Probable WRKY transcription factor 19 | 128 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q4V3A4 At5g40090 | 520 | 8e-051 |
| Q9LUJ8 Disease resistance protein-like | 520 | 8e-051 |
| Q9LNP4 F1L3.31 | 515 | 3e-050 |
| Q9SSP1 Similar to part of downy mildew resistance protein RPP5 | 483 | 2e-046 |
| D1GEG7 Disease resistance protein | 384 | 5e-035 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G17610.1 disease resistance protein-related | 523 | 2e-053 |
| AT5G40090.1 ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor | 520 | 5e-053 |
| AT1G72850.1 disease resistance protein (TIR-NBS class), putative | 483 | 9e-049 |
| AT5G48780.1 disease resistance protein (TIR-NBS class), putative | 327 | 1e-030 |
| AT4G09420.1 disease resistance protein (TIR-NBS class), putative | 306 | 3e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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