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Information for unigene UN32539
| FASTA Sequence |
| Unigene ID: UN32539 | Length: 1160 |
SSR | | GCCACACAAATACAACATTTTATTTTCGCATCTTACAAGTTACTTATAAATATATCCACACCAACATATTTTGTTTTCACATATTA
CAGAAGCAAAAGAAAGTATATATCTCACACATACAATATATATATATTGAAGTTCTTCGTCTCACTCACTGGTAGTGCCCATTTCA
ATAACCAACCTTATTTGAATCCAAATCACTTGATAGTTCTTTCTCTCACTGGCTCGTAATGCCTTAGCCACACTCCAGTATAGACC
TGCTGGGGTCTCATGATCTTGGTGTCTGGATCATCTAGCGACTCACGCCAGTGTGACAAGTATCCAGCAATACGCGAGACTATGAT
GAAATGTGGTGGAATTCCCATTACCCTACAGACTAATCCAGAGTAGAAATCAACATTTGGGTAAAGCTTTCTCTTAACAAAATATT
CATCAGTGAGCGCCGTCTTCTCAAGAGCAGCTGCTACCTCAAAGAAAGGATCCTTTCCAAAGATGGAGAATACTTCATCTGCCAGT
TTCTTAAGGACTTTTGCTCTTGGGTCGTAGTTTCTGTAAATGCGGTGCCCAAAACCTGACAGTTTCCACTTCTTGTTCTTCACGCG
CTCGATGAACTCTGGAATATTTTCAACAGTCCCAATCTCTGATAACATCTTAGGCACAGCCTCAACTGCACCACCATGAAGTGGAC
CATTAATGGCTCCAGTAGCTGCCCCAATAGCAGTGTATACATCAACGCCACTAGAGGAAAGATGCAGAGCAGCAGCAGTGGAGCAA
TTCATTTCATGTTCACAATGCAGTATGAAGATGGTGTCCAACACTCGTGCTAGCCGAGGATTAGGCTTGTAAAACCTATTTCCCAT
TGAGTCCAGCATATAGAGTAAGTTCTCTGTATAAGAAAGGTTGCTCAAAGGAAGAACAGGAGGCTTCCCTGCCGTCCTCAAAAAAG
CAGCTGCTGCAATTGTAGATGCCTGTCCAAGAATACGAAATATCTGTTTATCACGAACTTGTGCTGGCTTGTAAACATCTTGGCCC
ATATGAGCAGGGTTTGCATCAGGATGAAAGAGAGAAAGTACACTCATTGCACTGACAAAGGCACCCGTTGGGTATGCATCTTGAGG
CATGGACTGAATCATATCCTAAAGAAAACATTCAGAAAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34181 unnamed protein product [Thellungiella halophila] | 1299 | 7e-141 |
| NP_191434 citrate synthase 2 [Arabidopsis thaliana] | 1294 | 3e-140 |
| XP_002878238 hypothetical protein ARALYDRAFT_486329 [Arabidopsis lyrata subsp. lyrata] | 1293 | 4e-140 |
| NP_181807 citrate synthase 3 [Arabidopsis thaliana] | 1272 | 1e-137 |
| XP_002881873 hypothetical protein ARALYDRAFT_483376 [Arabidopsis lyrata subsp. lyrata] | 1272 | 1e-137 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LXS6 Citrate synthase 2, peroxisomal | 1294 | 1e-141 |
| Q9SJH7 Citrate synthase 3, peroxisomal | 1272 | 4e-139 |
| Q9LXS7 Citrate synthase 1, peroxisomal | 1258 | 2e-137 |
| P49299 Citrate synthase, glyoxysomal | 1245 | 6e-136 |
| Q8MQU6 Citrate synthase, peroxisomal | 913 | 2e-097 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WUX6 Citrate synthase | 1272 | 7e-138 |
| B9IFM7 Citrate synthase | 1256 | 5e-136 |
| B9IA46 Citrate synthase | 1241 | 3e-134 |
| Q0E2K1 Citrate synthase (Fragment) | 1229 | 6e-133 |
| Q6EUF8 Citrate synthase | 1229 | 6e-133 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G58750.1 CSY2 (citrate synthase 2); citrate (SI)-synthase | 1294 | 1e-142 |
| AT2G42790.1 CSY3 (citrate synthase 3); citrate (SI)-synthase | 1272 | 4e-140 |
| AT3G58740.1 CSY1 (CITRATE SYNTHASE 1); citrate (SI)-synthase/ transferase, transferring acyl groups, acyl groups converted into alkyl on transfer | 1258 | 2e-138 |
| AT3G60100.1 CSY5 (citrate synthase 5); citrate (SI)-synthase/ transferase, transferring acyl groups, acyl groups converted into alkyl on transfer | 179 | 2e-013 |
| AT2G44350.1 ATCS; ATP binding / ATP citrate synthase/ citrate (SI)-synthase | 146 | 1e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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