Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN32666

FASTA Sequence
Unigene ID: UN32666Length: 792 SSR 
CATCTTATATGTTTATTAAGACCTTATATTGTTCATGACCAAAAATCCCACCATGGGTAATTGCTTCTGGATTGGTCCAAGAGATT
AGTATTTGATTTGAAACCGCCCCAGTCATCAGATGATGTCAAGCAACTATCAGCTGGTTCCACAATATTCATCAAGTGATCTGCTT
CTTCTTCAAACCCAACAAAATACTCTCTCTTGATGTTGTTATTGTACCCATCATCATCATCATCATGACGACTTTTCTCATACACC
TCCATCTCCGGCCTAACCTCCTCCGGTTTGGACCTCCTGTTCTCTTCCTTTTCTGATTCATGATCCGTGCTGCCTAGAGTTCCCAC
CCCTTGACCATCACAACAATGTCTTCTCTCGTCCTGCTTTGTCTGCCTCTCCTCGTTTAGTATATGCAACTCAGAGACTAAACCTT
GATTTTCTTTCTTGAGTGACTCAAACTGAGAAGCTAAGTCGTTGTAGTTTTGTCTGAGAATGTTGAACTCTGTCTCTAGCTGCTTA
GTCTTCCAACGAGCTCTCTTGTTCTGAAACCATATAGCCACTTGCCTAGGCTGCAACCCAAGCTCTCTCGCTAACCGAACCATCCT
CCTTGGCTCAAGTCTCGTCTCAGACTTGAACCTCATCTCCAGTGATTTGATCTGCTCGTCGCTAAACCTTCTCTGATTGTTCTCGT
TGTGAATGCTCTTCTTCATCTTCTTCATGGTCATGAAAGGATCTGCTGACATCATCCCTAAGATGATTTATGATTTTTGTTGCCTC
TTTTTTTTTTGGAATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33957 unnamed protein product [Thellungiella halophila]9705e-103
XP_002882082 ATHB-7 [Arabidopsis lyrata subsp. lyrata]6632e-067
XP_002882084 ATHB-7 [Arabidopsis lyrata subsp. lyrata]6605e-067
NP_182191 homeobox-leucine zipper protein ATHB-7 [Arabidopsis thaliana]6443e-065
CAA47425 unnamed protein product [Arabidopsis thaliana]6434e-065

Swiss-Prot top hits (Blast detail)Scoree value
P46897 Homeobox-leucine zipper protein ATHB-76442e-066
Q9M276 Homeobox-leucine zipper protein ATHB-124675e-046
Q9XH35 Homeobox-leucine zipper protein HOX63108e-028
Q651Z5 Homeobox-leucine zipper protein HOX63108e-028
P46668 Homeobox-leucine zipper protein ATHB-62849e-025

TrEMBL top hits (Blast detail)Scoree value
Q2V402 Putative uncharacterized protein At2g46680.26282e-063
B9SVE1 Homeobox protein, putative5376e-053
B9GR61 Predicted protein4938e-048
B9I924 Predicted protein4821e-046
A5BGU8 Putative uncharacterized protein4265e-040

Arabidopsis top hits (Blast detail)Scoree value
AT2G46680.1 ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7); transcription activator/ transcription factor6441e-067
AT2G46680.2 ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7); transcription activator/ transcription factor6281e-065
AT3G61890.1 ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12); transcription activator/ transcription factor4675e-047
AT2G22430.1 ATHB6; DNA binding / protein binding / sequence-specific DNA binding / transcription activator/ transcription factor2848e-026
AT4G40060.1 ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16); sequence-specific DNA binding / transcription activator/ transcription factor2802e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information