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Information for unigene UN32699
| FASTA Sequence |
| Unigene ID: UN32699 | Length: 859 |
SSR | | GGTACAAACATACATGATGACATTTCAACTTCATAAAAGTCATAAAGCTACAACAACAACGACAACAAAGGGAGATACAAGCATTA
CAAAGATTACACAAACTCTACAAACAAACTGTACCATCATCACCACCAAAGTTTAAAGTCGGAAAGCTAAAACCCCAACTTTCATT
TTTTTTCTCTAGAAAACCGAGGAAAAGAGACTGTAATATTCGGTACCAGTTATCTAGCCGATCTGATCTGGAGAAGAAAAAAAAAG
AGACAACTTTCTCATTCGATATCGTCAATCCAGTCACCATATATTCGACTGATTTTCGCTGGTCCTTTCCATTTCTGATGAGTTCT
GATCCCAGGCTTCTGCGTCACCGCACTAGACGCTCTTTGCAATGCCACTCCACTGTGGTAACTAGCTTCTGCATGATGGGAAACGA
CTCCCGGAGATAAAAGTGTCGTCGTTGTGTCTGAATGTCCTTTCGGGTTTGGTCCTGTTAGCTTTATATCTGGATTGGACGATACT
CCTCCGTCTTTGCCTTCTCCTTCTACTAGCCCTCCACCAAATCTATGCAACTCTGCAGCTCCGTGAGCAAAATGACACTTAGCACC
AAACGGACAATACCCAGTAATCTCCCATTTATTGCAAATCCTTGTCTTCCAATTAGAAGGCTTCAAAATATCAATCCCACTTCCAC
CACCACCACCAAGCACTACTACATTGCTATTACCACCAGCACCACCACCACCACCGTAACCGCCAGGGCCTAAACTAATCGCAACG
CTTTCTCTATTCCTCGAAGCCTCATCGTGCAGAAACGTGCAGCTCTCTCCATAAGGACACCCTTCTTCAGTGTAGAACTTCTTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002890985 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata] | 731 | 3e-075 |
| NP_564396 zinc finger CCCH domain-containing protein 12 [Arabidopsis thaliana] | 706 | 3e-072 |
| AAL08263 At1g32359/F27G20.10 [Arabidopsis thaliana] | 706 | 3e-072 |
| XP_002527651 nucleic acid binding protein, putative [Ricinus communis] | 619 | 3e-062 |
| XP_002304341 predicted protein [Populus trichocarpa] | 600 | 5e-060 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LQM3 Zinc finger CCCH domain-containing protein 12 | 706 | 1e-073 |
| Q84UQ3 Zinc finger CCCH domain-containing protein 56 | 539 | 3e-054 |
| Q5PP65 Zinc finger CCCH domain-containing protein 28 | 273 | 2e-023 |
| Q9LT81 Zinc finger CCCH domain-containing protein 39 | 179 | 1e-012 |
| Q6L5G1 Zinc finger CCCH domain-containing protein 39 | 136 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GZ92 Predicted protein | 625 | 4e-063 |
| B9SNT2 Nucleic acid binding protein, putative | 619 | 2e-062 |
| A2YRG0 Putative uncharacterized protein | 538 | 5e-053 |
| A3BPV1 Putative uncharacterized protein | 533 | 2e-052 |
| B4FE66 Putative uncharacterized protein | 523 | 3e-051 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G32360.1 zinc finger (CCCH-type) family protein | 707 | 8e-075 |
| AT2G35430.1 zinc finger (CCCH-type) family protein | 273 | 2e-024 |
| AT3G19360.1 zinc finger (CCCH-type) family protein | 179 | 1e-013 |
| AT1G68200.2 zinc finger (CCCH-type) family protein | 120 | 9e-007 |
| AT1G68200.1 zinc finger (CCCH-type) family protein | 119 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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