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Information for unigene UN32724
| FASTA Sequence |
| Unigene ID: UN32724 | Length: 1270 |
SSR | | GTCAAAGAAAGATACATTTCAGGAAAACGTAAAGAGACAACAATGAAGTTTTACAATGTGTTTGTTGCAAGAAAACGTAAAGGAAT
ACAATGTATTTTTTTTATGATGTCATTGATGAAATGATCATCATCATCATCATCTATCATTGCCTGCGAGCAGCTCTTGACGCCAT
AGCTCGAAGGTTAGCTCTTGCTCTCGACAGAGAAACATCACTTGACGAAGAAGAAGAAGAAGAAGAAGAGGAAGTTGCGGCAGCTG
CAGTAACGCCAAACGCAGACGCGAATTCCTGCCGCTGTAACCGCAACGCAAACGCTGCATCGCCATCTTGATCCAACCTCACACCT
CTCCTCCTTCTCTCGCTTCTCTCTTCGGATACAAGTAATCTAGAAAGATCCTCTCTCTGCAACCTAGCTTGATATGCCGTTTCTCT
GTTCCTGCTTCTTAGCCTCTGATTAGGGTCTCTAAGGCTCGGCGTTTCCTTGCTTAGGAAGTTAGCAGAAGCAGCAGCTCTCTGTG
CTTCCACTTCTTTAGGGAACAGAAGCTGGATTGTGTTCCAAAGAACCGTATTAACCGTGCAATACTTTCCATTTCCTATTAGTTGC
CTGCACTTAGGGCATTTCCTTCCACACTTATCTGCTGCAGACCGTAAACACTTCTTGCAGAAGCTGTGTCCACAAGTTGTAGTACT
TGGTTCATAGCAAATCTCAAGACAAATTGCGCAAGACAACTCGTCACGAAGCTTATCAATGCAAGGAAGCACAACAGAAGTTGAGT
TCTTCTGCTCTGACAGCATCTTCTCATCCTTCTCTGCTCTCTTCTCTTCCTTTGTTTCTGTTTTCGTCTCCTTGTTCTTTCTGTTC
TTCTTCTCTGCAGATTTTTCCTCTTCACGTCGAATTACTTCATCGAGATCAATAACAGGTAAGGAATTAGAACTCTGCTTAATCCT
CTGCCTCCTTCTTGAACCTGAAGAAGGCGGGCTTGTTTTAGAGAGCAAACTGGATCGTCTCCTTCGCTTAGATGAACTTCTTTCAG
GGGTATCTTCCACCACGAAGCTAGCGATTATCAGATCCTCTTCGTCCCACCCCGCCAGAGCCGCCGCGGATTTGAATCTCGGGCTG
ATGAAAATGTCTGCGCTCGATCCATCTGTGGAGCGATTAGTGGCTTTGGATGGTGCTTCACTCACCATTGCCGAGATCTAGGGTTC
GTGTTTCCTGTTGATTCTTCCGAGAACGCTCCAGAGAGAGAGAGAGGGAGGAAGATAATAGTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189369 C3H4 type zinc finger protein [Arabidopsis thaliana] | 1275 | 5e-138 |
| BAB02787 unnamed protein product [Arabidopsis thaliana] | 1272 | 1e-137 |
| XP_002877042 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 1245 | 2e-134 |
| XP_002300081 predicted protein [Populus trichocarpa] | 768 | 3e-079 |
| CBI17696 unnamed protein product [Vitis vinifera] | 717 | 3e-073 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6PJ69 Tripartite motif-containing protein 65 | 159 | 5e-010 |
| Q7T308 E3 ubiquitin-protein ligase RNF168 | 148 | 1e-008 |
| Q14258 E3 ubiquitin/ISG15 ligase TRIM25 | 139 | 1e-007 |
| Q61510 E3 ubiquitin/ISG15 ligase TRIM25 | 137 | 2e-007 |
| Q810I1 E3 ubiquitin-protein ligase TRIM50 | 136 | 3e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LTZ6 Genomic DNA, chromosome 3, TAC clone:K1G2 | 1272 | 8e-138 |
| B9GIZ8 Predicted protein | 768 | 2e-079 |
| B9SLR0 Putative uncharacterized protein | 681 | 3e-069 |
| A2Y1W9 Putative uncharacterized protein | 573 | 9e-057 |
| Q2QUC7 Os12g0267900 protein | 573 | 9e-057 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G27330.1 zinc finger (C3HC4-type RING finger) family protein | 1285 | 1e-141 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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