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Information for unigene UN32795
| FASTA Sequence |
| Unigene ID: UN32795 | Length: 811 |
SSR | | GGTGGTCAAGATGATTCATGATGACATAGCGAGAAAGATACGACGTACCATTGTGAAAGAAAGCAATCTATACAAAAAAAATTGCA
AAAAAAAGAAAGAAAATATTGCATAATGGAAAATCAATTTAATACAGTTTTTTCAGAAACTATCGAGCATCCGCTGAGGAACAGGA
GAACTGATGACCTCCAAGATCTGAACAATCTCTGCAATTGTAGGCCGATTTGAAGGAATCTGAGAAGTACAGACAAGAGCAAGTTT
CAGAAAAGAAGAAAGCCCATCCTCAGACTATTCTTCCTCCACTGTAGGATCAATACACTCAACACATTCCCTTGTTCCAACAAAAC
TCGAACATTATGCTTAGTATCACAAAGCTGTTTTCACCGTACTCCACGGGTCTCCGACCAGTCACGTATTGTGCCTTATCGGCTGT
TGTGACTGCACATATAGTGACCTAAAAGTCTGTCTTTATACAGAGTAAGAGACTCATTCATATTAAAACATACAAAGTAAAAGTAA
GCAAGAACAAACGACCTTTGTGACAGCGCAATTAAATCTGTAATAATAATTACCAGAAGTCTCTGAATAGTTAGCTCGATCAAGAG
CTCTAACATCGGACCACTGTATGCGTTGTCTCTGATTGCCTTGTAAGTTAACTGATACGGCAAGAGCGCCACCTTCACCGCAATTG
AAGAAGTCTCACCTCCCATCTCTATCTTAGTAAACTCCACTCTCTCTCTCTATGTTTATATCTCTTACTCTGTCTGTATATGCGAT
TCGTGTTGGTAAGTGGTGGTGTTTCAGAGAAGAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189443 probably inactive leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] | 225 | 1e-016 |
| XP_002875419 hypothetical protein ARALYDRAFT_484589 [Arabidopsis lyrata subsp. lyrata] | 221 | 4e-016 |
| XP_002265846 PREDICTED: hypothetical protein [Vitis vinifera] | 180 | 2e-011 |
| CAN70282 hypothetical protein VITISV_023081 [Vitis vinifera] | 179 | 3e-011 |
| XP_002321093 predicted protein [Populus trichocarpa] | 172 | 2e-010 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LRT1 Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 | 225 | 6e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| A5BKN0 Putative uncharacterized protein | 179 | 2e-011 |
| B9IA97 Predicted protein | 172 | 1e-010 |
| B9RWV4 Receptor protein kinase, putative | 168 | 4e-010 |
| B9GUA2 Predicted protein | 161 | 3e-009 |
| A2WZ93 Putative uncharacterized protein | 159 | 4e-009 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G28040.1 leucine-rich repeat transmembrane protein kinase, putative | 226 | 4e-019 |
| AT5G01890.1 leucine-rich repeat transmembrane protein kinase, putative | 120 | 9e-007 |
| AT3G56370.1 leucine-rich repeat transmembrane protein kinase, putative | 115 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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