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Information for unigene UN32938
| FASTA Sequence |
| Unigene ID: UN32938 | Length: 699 |
SSR | | TTTAGCTACACACATTATTAACCTTATAATCACAATCACAGAAAGAAACCAATTATTACAACATAGACATTTTTATTCCAAAAGTA
GCAGCAAAGAAAGAACTTTGAGCTATACACAACCTTTGAATAAATGCGTCTTCAATCAGTAGTAGAAGAAGACACAAACGCTTCAA
TCTCATCAATAACAGAGCTAAACCTGGGCCTATCCTTAGGCCTAACGTACAAAACGCCGTCGTTTTGACGGAACTCACACATCCCA
ACATTTCCTCTTTTCTCCCACAGTCTCTCACCGAACCTACGGTGAGCAAAGTACACCTCCGCCAAAACGACCCCGTTGGACTCCTC
CTCAACCACTTCCACTGGCAACCTCTCGTAGTGCTCGACTTTGATCCCTTCCAGCTAGTCAAGCCTCACGAGCCCGCTTTCTGAAA
CCGCGTAAAGCTCGCCGCGGATCCGTTGACCCGACCCGGATCTGTTGATCAAGTAAGGGATCCCGTAAAGGCCCGTGACGAGCGGG
AACGGTAACCGGGTCGTGCGTTGGCCGACGTAAACGGCGTCGTTCTTGGAGATGAGGTCTTCTATGAGGAAATGGTTTGGATGGTT
TCTTTTCAGCGTTCCGTACACGAAGATGTGGTTCGCGAGTGCTCCTCCTCCTCCTCTCCTCCCATGGTTTGGCGCGACGCGAGGCT
CGGGCTTCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199484 AIG2-like (avirulence induced gene) family protein [Arabidopsis thaliana] | 707 | 1e-072 |
| XP_002865167 hypothetical protein ARALYDRAFT_916756 [Arabidopsis lyrata subsp. lyrata] | 701 | 7e-072 |
| XP_002270495 PREDICTED: similar to Os03g0854000 [Vitis vinifera] | 376 | 3e-034 |
| XP_002271171 PREDICTED: similar to Os03g0854000 [Vitis vinifera] | 368 | 3e-033 |
| NP_001051934 Os03g0854000 [Oryza sativa Japonica Group] | 354 | 1e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M8T3 Putative gamma-glutamylcyclotransferase At3g02910 | 246 | 2e-020 |
| Q66I06 AIG2-like domain-containing protein 1-A | 175 | 3e-012 |
| Q9W0Y2 Putative gamma-glutamylcyclotransferase CG2811 | 175 | 3e-012 |
| Q4KM86 AIG2-like domain-containing protein 1 | 158 | 3e-010 |
| A3KNL6 AIG2-like domain-containing protein 1-B | 158 | 3e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FIQ3 Genomic DNA, chromosome 5, P1 clone:MZA15 | 707 | 9e-073 |
| B9SNV5 Putative uncharacterized protein | 390 | 5e-036 |
| C5WS03 Putative uncharacterized protein Sb01g000775 (Fragment) | 355 | 6e-032 |
| A2XP74 Putative uncharacterized protein | 354 | 8e-032 |
| Q84T74 Expressed protein | 354 | 8e-032 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G46720.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02910.1); Has 249 Blast hits to 249 proteins in 85 species: Archae - 5; Bacteria - 65; Metazoa - 121; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | 707 | 6e-075 |
| AT3G02910.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46720.1); Has 210 Blast hits to 210 proteins in 66 species: Archae - 2; Bacteria - 27; Metazoa - 122; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). | 246 | 2e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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