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Information for unigene UN33000
| FASTA Sequence |
| Unigene ID: UN33000 | Length: 930 |
SSR | | GAGAGTAATAAGTGGAACTGTTTTGTTGAGTGAGAGCTTACTTGTATTGGTAAGCTTTGAGTCCGAAGGTTGGGAAGTTGGAGAAG
CCGCAGTTGTCACCTCCGGGGAAGAGCCATTGGAAGAAACTCCACAAGAAGCTTAAGGAGAAGAATCTCCCCAACATCCTCACTTG
TTTCTTGGCTAGCTTGGCTCCTTGAGGGGTATGAAAACTGTTGATGAGATGAGCAGTTGCTGTACCGCTTGGGTATGTTAGTTTGA
AGTCTATTACCATTATCTTTCGCAGGGGAACAACAGAGAAGAGACCAAGAAAGCTGACGACAAAGAGGAAACCAATAATCCAACCC
AGAGAAGGGTCCTTGAAGCCACGGGAAGCATCTCCTGATTGTTTAGCAATCCGTTCACTCATCCCAAAGAGGTATGTCCCAAACCC
TCCGCTGAAGGCAATGCCGGAAGAAGCAACAACGCAGGTCTGAATAACAGTATTCTCCTGGCGAGTAAAGGGCTGTTTCAAGTAAC
CAGACTTATAAAGCACCTTGGTCCATGTCTTGACGAAGAAGAAACCCAGAGGACCAGCAGAGACGTTGAGCGATGGTATGATTCCC
GTCGTGAGGTTAAGCTTCATGACGATGAAGCTAAACAAGATGCTTAGCATAAAGCTCACCACGAAAGCCCTCAGAGTCAGCTGCTT
CTTCCACGAAGGTACTTCTCTGCTTTCGAAGATCTTCTCCACAGATTCTTCCTCTTCATCTTCCTCTTCCTCTTCTTCGACATGTT
TGTTCGTCGCTTTCTCGGATTCTGGACTATACCCACTTTCCTGCAACTCGTGTTCCACAATCTGACGATCTTTGTCTGGATTTCTA
ACTCCCTTTCTCATCCTATCTCTCTCTCTCTCTCTCTCTCACACACGTTTTCTCTGTTTCTTAGTTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABB76762 YSL transporter 2 [Noccaea caerulescens] | 1344 | 3e-146 |
| BAJ33889 unnamed protein product [Thellungiella halophila] | 1328 | 2e-144 |
| NP_566584 putative metal-nicotianamine transporter YSL5 [Arabidopsis thaliana] | 1288 | 1e-139 |
| AAL09744 AT3g17650/MKP6_20 [Arabidopsis thaliana] | 1280 | 8e-139 |
| XP_002883075 hypothetical protein ARALYDRAFT_479246 [Arabidopsis lyrata subsp. lyrata] | 1275 | 3e-138 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LUN2 Probable metal-nicotianamine transporter YSL5 | 1288 | 4e-141 |
| Q6R3K4 Probable metal-nicotianamine transporter YSL8 | 1102 | 2e-119 |
| Q9SHY2 Probable metal-nicotianamine transporter YSL7 | 987 | 3e-106 |
| Q7X660 Probable metal-nicotianamine transporter YSL11 | 905 | 1e-096 |
| Q6H7J6 Probable metal-nicotianamine transporter YSL14 | 901 | 3e-096 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2XPY4 YSL transporter 2 | 1344 | 2e-146 |
| B9SIR4 Oligopeptide transporter, putative | 1021 | 6e-109 |
| B9H280 Oligopeptide transporter OPT family | 1008 | 2e-107 |
| B9N9G4 Oligopeptide transporter OPT family (Fragment) | 1004 | 6e-107 |
| B9S275 Oligopeptide transporter, putative | 988 | 4e-105 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G17650.1 YSL5 (YELLOW STRIPE LIKE 5); oligopeptide transporter | 1298 | 3e-143 |
| AT1G48370.1 YSL8 (YELLOW STRIPE LIKE 8); oligopeptide transporter | 1186 | 3e-130 |
| AT1G65730.1 YSL7 (YELLOW STRIPE LIKE 7); oligopeptide transporter | 987 | 3e-107 |
| AT3G27020.1 YSL6 (YELLOW STRIPE LIKE 6); oligopeptide transporter | 717 | 6e-076 |
| AT5G24380.1 YSL2 (YELLOW STRIPE LIKE 2); oligopeptide transporter | 715 | 1e-075 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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