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Information for unigene UN33063
| FASTA Sequence |
| Unigene ID: UN33063 | Length: 849 |
SSR | | AGAGAAACGAAACGGAAGGATGGAAGTAAAAAAAGAAACACACATCTTTAGTATCAGTCCTCTCAAAAAGAACTCGGCCCCCACGG
TCACCAGTTGCAAGGGGGCCTCCACTTTTATCAAACTCAATGGCTGAAATGATGTCAACTGGAGAAGATTGATCAATGAAACAAAT
CACTAACCAAATCCTTAAGTCTTCAAACACCCTCCGGATCTAAAACTCATCAAAAATAAACATTTCACAATCTCTAACGCAATAAG
TACCTTCCTGAACTTCTTCTCCGGCGGTTCGCTCACCGAAGACCTGAGAGAATCTCCACTCTAAAGACGAAGGAGTGCCACTACTA
GCCGCGGTGGAGGAGGAGGAGGCACCGTCCATAGTTTCCTTTTTTTTTTGATAATCCAAATTCAAAAATCATAAACAGAAATCTGA
GCTTTAAAATCTTTAATCACCGAGTCCATCGATTCACATTCACTCCCATTGTTTTCTTCATCGATTGAATCACTTGATCCCTCATT
AATTTTCTCTCTCTCTAGAAAATAGAGGAACGAGAAAAGAAAAAAACGCCTCTCTCTCTCTCCCTCAAAGTATAAAATGACCAAAA
TACGTATAAGCTCTTTTTCGGGTAGCTACCTATAAGTTAATGTCTTAGTACTGTATAACGTTTTTTGTCTTGATATCTCAAGGTTA
CAGACGGTGACATTCTTTATTCAGATCAGTTAATATGAGTGGGCAGTGTGACCTATGTATACTAAGGGGGATGTATTGAATCATTG
ATTTTAAAAGTTTTTGGGGTTGTTTTAAAATCCCATGTTATTCAACTAAAGATTTTAAAATTTATTTTCAAATCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564033 Protein phosphatase 2A, regulatory subunit PR55 [Arabidopsis thaliana] | 146 | 2e-007 |
| NP_849681 Protein phosphatase 2A, regulatory subunit PR55 [Arabidopsis thaliana] | 146 | 2e-007 |
| AAG29596 Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform [Medicago sativa subsp. x varia] | 146 | 2e-007 |
| XP_002280910 PREDICTED: hypothetical protein [Vitis vinifera] | 146 | 2e-007 |
| CBI35975 unnamed protein product [Vitis vinifera] | 146 | 2e-007 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39247 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform | 146 | 1e-008 |
| A2X2K3 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform | 138 | 8e-008 |
| Q0E2P1 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform | 138 | 8e-008 |
| Q5Z8Z7 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform | 137 | 1e-007 |
| Q38821 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform | 132 | 4e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WW19 Type 2A protein serine/threonine phosphatase 55kDa B regulatory subunit | 146 | 2e-007 |
| Q9FVD4 Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform | 146 | 2e-007 |
| B9N1B7 Predicted protein | 143 | 3e-007 |
| Q9FVD5 Ser/Thr specific protein phosphatase 2A B regulatory subunit alpha isoform | 142 | 4e-007 |
| B7ERB7 cDNA clone:J033025A11, full insert sequence | 138 | 1e-006 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G17720.1 ATB BETA; nucleotide binding / protein phosphatase type 2A regulator | 146 | 9e-010 |
| AT1G17720.2 ATB BETA; nucleotide binding / protein phosphatase type 2A regulator | 146 | 9e-010 |
| AT1G51690.1 ATB ALPHA; nucleotide binding / protein phosphatase type 2A regulator | 132 | 4e-008 |
| AT1G51690.2 ATB ALPHA; nucleotide binding / protein phosphatase type 2A regulator | 132 | 4e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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