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Information for unigene UN33093
| FASTA Sequence |
| Unigene ID: UN33093 | Length: 1125 |
SSR | | GGTAAAGGGTTTGCCAAGCAACCGTTTTTTATATAAAAAAAATTGTTAAGAAATGCACGGCTGATGTATATGTGATTCTTTTATGT
GGAGCAACTAATACAAACATCAGTTTACTAAAAGTCTTACAAGAAGACACAGAGAAAGAAAGATGAGATTGGCAAGTTTGAATAAA
ACGAACAAGATATTAAGTATCACTGAAATTGCTATAATTTTTTTTTTGTTTTGCAAGAAACAAGAGTTACATGTGGTAATTGTTTG
CTTGTTTATAGTTAAGTAATGGAATACAAACTAAATGGCGATGGTATTAGTAAAGGGCGGAGCTTGCTGCAAACCGGGGCAAGCAG
GAGTTGAATAAAGAAAAGATACGAGTTTATTATAGGCTAGAGAAGTACAAAGATTCAAAGCTAGGAAATGAAAAGAGGCAGCCTTA
GTTAGGTGGTGGTGTGGTTTTGCTGACGAGCTTCTTCTTCTTCTTGTTTAAGCTCCTCTTTCAGTCTTCTCTCAGTCTCCGCCCTC
TCAAAAGCTTCTATCAGTCTTTTTTCTTTCTCTTCTAGCTCAATAGCTTCCTTCAGCTTCTTCTCATTCTCCTCTTTCAACCTCCT
TTCTTTCTCCTTCTGCTCAATAGCCTCTGGCTCTCCTCTCATTCTCTGCCTGCTCAAGAGCCTCTCTGGCTCTCCTCTCATATGCT
TCCCTCTCTTTAATTTGTCTTTCCTTCTCTTCTTGTTCAAGAGTTTCTTTCATCCTTCGCTCCACCTCTGCCTTCTCATGAGCCTC
TTTTATTCTTCTCCGTTCGTTTTCTTCTTTTTCACGTGCTTCTTTCATTTTCCTTTCATTCTCTTCTGCCTTCTCACGGGCCTCTC
TCATTCTACGGTTCTTTTCTTCCTTTTCAAAAGCTTCTTTTAGCCTCCTTTCATACTCTTCTTGTTCTTTCCTTCTCCTCTCTTCT
TCTGCCTTTTCGCGAGCCTCTCTCTTTCTCCTCTCTTCTTCTTCCTTTTCAAAGGCTTCTTTTAGCCTCATCTCTTCTTGTTCGAG
CTCCTCTTTCAGTCTTCTCTCAGTCTCCGCCCTCTCAAAAGCTTCTATCAGTCTTTTTTCTTTCTCTTCTAGCTCAATAGCTTCCT
TCAGCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB16841 trichohyalin like protein [Arabidopsis thaliana] | 500 | 3e-048 |
| NP_195370 chaperone DnaJ-domain containing protein [Arabidopsis thaliana] | 500 | 3e-048 |
| XP_002867010 hypothetical protein ARALYDRAFT_328116 [Arabidopsis lyrata subsp. lyrata] | 448 | 3e-042 |
| XP_001310646 smooth muscle caldesmon [Trichomonas vaginalis G3] | 382 | 1e-034 |
| XP_001304161 trichohyalin [Trichomonas vaginalis G3] | 370 | 4e-033 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q1E1H4 Stress response protein NST1 | 267 | 1e-022 |
| Q2GZN9 Stress response protein NST1 | 261 | 7e-022 |
| Q5KHY3 Stress response protein NST1 | 245 | 5e-020 |
| Q01042 Immediate-early protein | 226 | 8e-018 |
| Q10475 Eukaryotic translation initiation factor 4 gamma | 225 | 1e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O23230 Trichohyalin like protein | 500 | 2e-048 |
| A2FBI1 Smooth muscle caldesmon, putative | 382 | 1e-034 |
| A2FV34 Trichohyalin, putative | 370 | 3e-033 |
| Q54H40 Putative uncharacterized protein | 310 | 2e-026 |
| B4P2W2 GE16990 | 306 | 7e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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