Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN33138

FASTA Sequence
Unigene ID: UN33138Length: 968 SSR 
ATGGTTCCATGTGAAAGTTGTTGAAGAAACATTCTGAATTATACAGAAAGCCATGGTCGTAAGTTCATACTCATTTTCTACCTAAA
AAACAACAACCGAAACCTCAGGAGATGATATCTCTCTTATATATACAAAAGCATGTCAACTCGTTTGGAAACTTATAGCTCCATTT
TCATCTGATTTGGGTGCAAAGTAGCTGAACTCATCAAGAAATTGGCTTCATGATGAACCTCTTCTCCCCCCACTCCAACGGGAGGT
AGCTATCGAGAGTCCACTGTTGCAGCTGATGATAAGATTCTTCTCCCTTCTTGCTCTCTCAGCTAAGCTATGGTTATCAGTAGCTT
GACCACGACGAGCTCTAACGTGAACATACGGAAGCTTCTCTGCTTCATCAGAGCTCTTGTTCTTCTTCATCGAGCTTTTGACCTTC
TTCCCACGCTCTTTCCTCTTGTTCTGATTCTGATTCTGGTTCTCAGCCGTTGGATAAGACACGAGCCGCTGAGATGAATCGTTCTC
ACAAGGCTCGGACTTGACTCTACCTGTCGAACTCGAAGGTGCGGACTCGCCGGAGAAGTTTCCGTTTTGGTCTTCAGCAGCAACCA
CCGAGAAGCGAGCGATATATCCGGCGAAAAGCTCCATGGCCTGAGTCGCCGGCATCTCGAGCAAAGACGTGAAGGAACCGGTGTTC
TCCGGCGGCATCATCACCAGCTGCTGAATTTCGTCGCTGAAACTGAGCGATTCAAGTCCGGTCACCGCTTCTCGGCACAACCCTTG
GGTCAGATGATCCATTATGAGGAAAATTCGCGCTTAAACCGGAATTAACCGAGTTTAGTTTCAGAGTTTAAAAAAAAAAAATAACA
GAACCGACCGACTTGAAATCTCTCTCTCTCGGAGAAAGTTTTATATCTCTGCGTGTTGTGGGAGTAAAGAGATTACGTCAGAGCTT
ATTTTGAGTGAAGAGAAAGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33814 unnamed protein product [Thellungiella halophila]3542e-031
NP_850368 transcription factor bHLH48 [Arabidopsis thaliana]3264e-028
BAD43347 putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]3264e-028
NP_001031530 transcription factor bHLH48 [Arabidopsis thaliana]3264e-028
XP_002879977 hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp. lyrata]3122e-026

Swiss-Prot top hits (Blast detail)Scoree value
Q3EAI1 Transcription factor bHLH603441e-031
Q8VZ02 Transcription factor bHLH483262e-029
Q93VJ4 Transcription factor BEE 21683e-011
Q9CAA9 Transcription factor bHLH491551e-009
Q93W88 Transcription factor bHLH1371541e-009

TrEMBL top hits (Blast detail)Scoree value
A0NAB1 Protein At2g423003263e-028
C7SQI9 BHLH transcription factor PTF12375e-018
B9II37 Predicted protein2251e-016
A2Q3E9 Helix-loop-helix DNA-binding2242e-016
B9N6V6 Predicted protein2196e-016

Arabidopsis top hits (Blast detail)Scoree value
AT2G42300.1 basic helix-loop-helix (bHLH) family protein3261e-030
AT2G42300.2 basic helix-loop-helix (bHLH) family protein3261e-030
AT3G57800.1 basic helix-loop-helix (bHLH) family protein2812e-025
AT3G57800.2 basic helix-loop-helix (bHLH) family protein2812e-025
AT4G36540.1 BEE2 (BR Enhanced Expression 2); DNA binding / transcription factor1683e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information