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Information for unigene UN33180

FASTA Sequence
Unigene ID: UN33180Length: 661 SSR 
AAACGTGAGTTTATGTATTATTATGGGCTATACAGAACGTTATCTAATAATATTCTCCCTCAGTAAAACAAAAATCTTTGAAAAAT
TTACAAACTTAAGAGGTTTGGTTTCTTTTGTTTGTTCTTTTCTTATGGGTCGATTCTGATGTCGAGAGGCTCGTGTAGATGATCCG
GTGGTGGTGGTGGTTCTGCTATAGGTAGCATGGATGTGTCATCATTCTTCTTCCCATCTAATATATCTGCTGCATTTTCAGCCAAT
GCTTTCTCCAATGATGACTTCGCCACTCTTGTAATGCATACTATCAGAATTACAGCTAGAGCAATGCCAACCATCATTAGTACCCA
ACGAAAAACTGACACCTCATGCCATCCATGTGTGATATCAGACAGATCTTTCAGTGTTGTTCCAACATAAACTAGCGCAAATGTAA
TGGGCATCATTCCCAACCAAGTCTCCGTCGTAGTCATACTGATCTCCATTTGCGTAAGATCCTGGCTTCAGCCACGGCCTCGCCCT
TAACCCCTCCACTTTCGCCAGATTTGTACGCCTCTTCCCCTGATTCTGGAGTTATGATTCAGACGCCTCGCCTCTATCTCCCGCTG
AATTGACACTGGGATGAATCTGTGAGTGAGACAGCAGAAATCGATAGAGAGAAAGAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892154 hypothetical protein ARALYDRAFT_887478 [Arabidopsis lyrata subsp. lyrata]4543e-043
NP_171825 SNARE associated Golgi protein family [Arabidopsis thaliana]4516e-043
AAC72122 F15K9.14 [Arabidopsis thaliana]4391e-041
XP_002463296 hypothetical protein SORBIDRAFT_02g041420 [Sorghum bicolor]3002e-025
XP_002280327 PREDICTED: hypothetical protein [Vitis vinifera]2965e-025

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q6NMJ6 At1g032604586e-044
Q9ZVS7 F15K9.144462e-042
C5X434 Putative uncharacterized protein Sb02g0414203001e-025
C4JB61 Putative uncharacterized protein2955e-025
A2YPG2 Putative uncharacterized protein2902e-024

Arabidopsis top hits (Blast detail)Scoree value
AT1G03260.1 LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19070.1); Has 3432 Blast hits to 3432 proteins in 730 species: Archae - 8; Bacteria - 1831; Metazoa - 239; Fungi - 87; Plants - 162; Viruses - 0; Other Eukaryotes - 1105 (source: NCBI BLink).4584e-046
AT5G19070.1 LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03260.1); Has 3029 Blast hits to 3029 proteins in 693 species: Archae - 10; Bacteria - 1724; Metazoa - 229; Fungi - 74; Plants - 161; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink).2667e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information