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Information for unigene UN33187

FASTA Sequence
Unigene ID: UN33187Length: 1129 SSR 
CCGGTATTTGACAGTTTAGATTCTGGGAGATCTTCGCAGGAAGGCGGATTTGCAGTGGGTATGACATATGAATCGGGTTGGTCATC
CGCAGATACATGACCAAGCTCAGCAAAACACCCATCCATCACTTCTTTTCCTATGGATTTGCTCTCCCCAACCGAGATATTTTTCC
CCTTCTCTGCAGATGGTTCTCCAGAAACAATAGAACTGCAGTATATCTGGGAAGCTCTCTCGCTCTTTGGCCTGTCTTGTGAATTT
CTTTTAGAGGTTTTTGTTCTTGCCCGCTTTGAAATGGCATCTAGACGTGTGGTAGGCTTTAGCGCACTTCTGTCTTGGGAACACTT
TGGGCAGATCCACTTGCCATTTGGAATCCGCTTGAGAGGAGGAGTGAGGCATGCGGTATGATAGGTCCGAGGACAACTATCACAGC
ACAGCAAATCACCACCAAGGTCACAGATCACACATTCAAAATAATTCCCGTCATGTCCCTTCCTTTTAGAGGAGGTCCCTTGAGGA
GTCACATCAATGCTAGGCTGATGATTAGTTAGCTTCTCAGAAGAAGTGAATTCCGGAGAACCAACAGCCAGAGAATTATTTTCAGC
AAGAGACTGTCCCTTTCTTTTCGAAGTCCGCTCAGGAGCCGAACCAGCCTTAAGCTGGTGCTTAGTTGGTTTATCAGAAGAAGTGC
AGTCCGGAGAATCAATAATAGCCGCGGAAGTATCCCCCTTTTGGTCTAACAAATCCAGAATACACGGAAGCTTTCGTCGTCTCTGC
TTCATGACCCAATCTCTATCAATCATTTCACTGCCAGAATCTTTCATATTCTACTTCTGGATTCATAGCACACTGCAATGGACAGA
CCTTCATGTGTAAAATCCACAAAACTACAGAAGTAACCAACAAACACTGATCTCAGAAGAACTTTGCTTCCACAGAATCTGAAATC
GATTGGGGTGGAAATTAAGTTAAAACACTAAGTCTCGATGATCGAAGGACGAGAAATCCGAAGACGGAGGCTAGGGATTGAAGGAA
GTCACGGAGGAGAGATGAGAGATGAGGAAAGGGGGCTCTTCTAGGGCACGGCCTCGACGAGAGAGAGAGAGAGAGAGAGAGAGAGA
AGTTGCGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863544 hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp. lyrata]7055e-072
AAC79140 human Mi-2 autoantigen-like protein [Arabidopsis thaliana]6912e-070
NP_199293 chromatin remodeling 4 protein [Arabidopsis thaliana]6912e-070
XP_002329920 chromatin remodeling complex subunit [Populus trichocarpa]3883e-035
XP_002303505 chromatin remodeling complex subunit [Populus trichocarpa]3857e-035

Swiss-Prot top hits (Blast detail)Scoree value
O16102 Chromodomain-helicase-DNA-binding protein 32106e-016
O97159 Chromodomain-helicase-DNA-binding protein Mi-2 homolog1901e-013
Q14839 Chromodomain-helicase-DNA-binding protein 41846e-013
Q6PDQ2 Chromodomain-helicase-DNA-binding protein 41846e-013
Q8TDI0 Chromodomain-helicase-DNA-binding protein 51846e-013

TrEMBL top hits (Blast detail)Scoree value
O48579 Helicase-like protein6912e-070
B9N3S4 Chromatin remodeling complex subunit3882e-035
B9GVF7 Chromatin remodeling complex subunit3855e-035
B9SCD7 Chromodomain helicase DNA binding protein, putative3774e-034
B8B6D8 Putative uncharacterized protein2691e-021

Arabidopsis top hits (Blast detail)Scoree value
AT5G44800.1 CHR4 (CHROMATIN REMODELING 4); ATP binding / DNA binding / chromatin binding / helicase/ nucleic acid binding / protein binding / zinc ion binding6918e-073
AT5G35210.1 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein1675e-012
AT5G35210.2 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein1675e-012
AT5G12400.1 PHD finger transcription factor, putative1577e-011
AT5G22760.1 PHD finger family protein1569e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information