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Information for unigene UN33240

FASTA Sequence
Unigene ID: UN33240Length: 957 SSR 
GGAAAACAAAGCTCGATCCTTTCTTTTAGGGTTCACACTAAGAGATCTCGTCTCTCTCTCTCTCGAGCAAGAGTTTGGATTCGTAC
GCATTGGATTGCTCTATATGATATCTGGATTTGGCGGGAGTTTGTTATCATCTCTCTTTAACCGGGAAGGTATATCCGTTGGTGCC
TCTGGTGCATTGTTCGGCTTGCTCGGCGCTATGCTTTCAGAGCTTCTCACTAACTGGACTATATACGCTAATAAGTTTGCAGCTCT
TTTGACACTCATCTTCATCATAGCCATTAATCTAGCAGTAGGTATACTTCCACACGTAGACAACTTTGCCCATCTCGGAGGATTCA
CTTCCGGGTTCCTTCTAGGCTTTGTTTTCTTGATCCGTCCTCAGTATGGCTACTTCAACCAGAGGAACAACCCTCGTGGCTACGCT
GCACCTTCTGCTAAATCAAAACACAAGCCGTACCAATACGTTCTCTGGATCACTTCTCTACTTCTTTTGATTGCAGGATATACCGT
TGGGCTCATTGTACTTCTTCGAGGGACGGATTTGAACAAGCACTGTACATGGTGCCATTATCTCAGTTGTATGCCTACGTCTCTAT
GGAACTGTAAATCGCAAAATATGTACTGTCAGTCGAGCCAGATAGGGAAGCAGATGAACCTGACGTGTATAGCTAACGGGAGAACA
GAGATGTATACGCTTGGTAGCGAGAACCAGTCTAAGATTCAGCAAATGTGTTCCCAGCTATGCAGCTGATACACCCACCACTAAAC
CATCTAATTGCTTTGTAGACAGTAGGGAATTATCTTGAGAAGGGACAAAAGGGCGGTTCACTTGATTTGATTATTCTTGTTTGATC
ATATTATTGTCTGGTTCTACTTTTCTTTTTTCTTCATTGCATATGTAAAGACCATTTTCAGATTTATTTGAATTAGTAACAATGAA
GCTGATGAGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180469 protein RHOMBOID-like 1 [Arabidopsis thaliana]11356e-122
XP_002879198 hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp. lyrata]11356e-122
XP_002283488 PREDICTED: hypothetical protein [Vitis vinifera]9294e-098
CBI16118 unnamed protein product [Vitis vinifera]9294e-098
CAN64890 hypothetical protein VITISV_021082 [Vitis vinifera]9115e-096

Swiss-Prot top hits (Blast detail)Scoree value
Q6GMF8 Rhomboid family member 12293e-018
Q6PIX5 Rhomboid family member 12258e-018
Q499S9 Rhomboid family member 12241e-017
A7YWH9 Rhomboid family member 12194e-017
B0VX73 Rhomboid family member 12194e-017

TrEMBL top hits (Blast detail)Scoree value
Q0WQX7 Putative uncharacterized protein At2g2905011354e-122
A5ATD5 Putative uncharacterized protein9114e-096
B9T4C7 KOM, putative8872e-093
B9HBM6 Predicted protein8747e-092
B9ESV2 Putative uncharacterized protein8594e-090

Arabidopsis top hits (Blast detail)Scoree value
AT2G29050.1 ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)11352e-124
AT3G53780.1 rhomboid family protein7491e-079
AT3G53780.2 rhomboid family protein7491e-079
AT1G63120.1 ATRBL2 (Arabidopsis thaliana Rhomboid-like 2); serine-type endopeptidase6665e-070
AT5G07250.1 ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)6631e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information