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Information for unigene UN33249
| FASTA Sequence |
| Unigene ID: UN33249 | Length: 1068 |
SSR | | GTGTCAACATCAACATGAAATCTCTTGATACACTTGTTCTCACTGATTGCTCGTCATTGAAAGTCTTTCCCGAGATTTCCACAAAC
ATCGGAGTTCTAAAGCTCACTGGAACTGCAATAGAACAATTCCCTCCATCAATCATGTCATGGCCTCGTCTACGTGAACTTGTAAT
CAAGGGATGCGCGAAGCTGGTTTCTCTTCCGCAGCTTCCGGACTCCTTAGAATGCCTAGTCGCAGACAATTGCGGGTCCCTCGAAA
GACTAGATTGCTCTTTTCACAAGAAAAAGTTTAATGCGCTCTGCTTTGTTAACTGCTTTAAACTGAATCAAGAAGCAAGAAACCTT
ATCATCAACACATCGACAAGAGACTTTGCAAGTTTTCCCGGAGAAACAGTGCCTACGTGTTTCACGTACCGAGCCACCGGGAGTAC
CATGTCAATGACGTGGAATGGATTAGATACACAGTACTTTCCTACATCCTTGAGATTTAAAGCTTGCCTCTTGCTGGTTTATAAGG
GTGACGTGGATGCTGGTGATCGCCACTGGTCTGAAACAACCTATTGCATCAAGGACAAACTGAGTGGTGTTAAACCAGTAAGTTAT
TTTTATAGATTGTTCGATTTGTCTCCAACTTCAGGGGAGCATCTGTTCGTATTCGAAATTGATGAAACTGTGAGTTCCCCCGAGAT
AGTCTTTGAGTTCGAACACAAAAACAAAAATTGGGAGATTAAAGAATGCGGGATACATCCTCTAGAAACCTTGGCTCCCTCATGTT
AATTGAAGCTGTGAAAATAAAAAAAAAAACAAATCGCATTTCCACTAAATAACTTCTCTTTAGAAAACCTTTACTTTGAAGTTGAT
GTGAATCTTTCTCTGTATTTGTATAAGATTATCATTGTGCTATGTTGGGTTTGATTACAAATGTGCCGGCATATATATATATATAT
GATGCATGTATGTGCATAATCATAATAATCCTTTTATATCATAAATATCAAGCAAACAATTTGCTATGATAATCTTTGTTGAAATG
GATCAACACAAACAAAATGAAAACCGTTTCTACAAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_179024 TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 399 | 1e-036 |
| AAD25848 disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] | 399 | 1e-036 |
| XP_002863116 predicted protein [Arabidopsis lyrata subsp. lyrata] | 399 | 1e-036 |
| XP_002862328 hypothetical protein ARALYDRAFT_497514 [Arabidopsis lyrata subsp. lyrata] | 372 | 2e-033 |
| XP_002870849 predicted protein [Arabidopsis lyrata subsp. lyrata] | 370 | 3e-033 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82500 Putative disease resistance protein At4g11170 | 151 | 4e-009 |
| Q9SZ67 Probable WRKY transcription factor 19 | 125 | 4e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SI51 Disease resistance protein (TIR-NBS-LRR class), putative (Fragment) | 399 | 1e-036 |
| Q9FKM9 Disease resistance protein-like | 360 | 3e-032 |
| D1GEC7 Disease resistance protein | 326 | 3e-028 |
| Q19EE9 Disease resistance protein (Fragment) | 205 | 3e-014 |
| Q19EF1 Disease resistance protein (Fragment) | 204 | 4e-014 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G44630.3 disease resistance protein RPP1-WsB-like (TIR-NBS-LRR class), putative | 435 | 4e-043 |
| AT3G44630.2 disease resistance protein RPP1-WsB-like (TIR-NBS-LRR class), putative | 435 | 4e-043 |
| AT3G44630.1 disease resistance protein RPP1-WsB-like (TIR-NBS-LRR class), putative | 435 | 4e-043 |
| AT2G14080.1 disease resistance protein (TIR-NBS-LRR class), putative | 399 | 6e-039 |
| AT3G44480.1 RPP1 (recognition of peronospora parasitica 1); LRR domain binding | 395 | 2e-038 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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