Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN33266

FASTA Sequence
Unigene ID: UN33266Length: 1185 SSR 
CGGTCAAAACGTTTTCATAGATTTTTACCTAGTGATTATTAACAAGTGCACACTTTGATACTTGATATCATATAAATATCCCATTT
CGTTAATACACATAAGCAAACACTAGAATTGACTTCTAATAGAAAGTGACCACATAGCGAAAACATATTAGAAATGGTTTGTAAAA
CGCTCACTGTACATAATAGAGTTTTTTTTTTTTTTTTGCTAAAACATACATAATAGAGTTATAAATCTCGTTCAAGCAAATTAAGA
ATCCAAATTCAAAACGAGGGAAAAAGAAGATAGCTCAAAGCTTCAATGTTAGATCTGGAAGAGAACACTCCATGTCCACTGCTTGT
TTGACCTCCAAGTAATCCACTTTTCGTTCACCTAAATCACCATCAACCGCTTCAACCGCTACCTCATTGGCCCGTTGCCTGAAACT
CCCGGGCCATAGCAGCTCGGCCTCGTCGTCCTCAACGAGAAAAGGTACGAAATTACTGAAATACCCCTGGTTAAACCTGGCAATGT
TTCTAATGATCGTCTCTTGTGTTGGCCTTGTAATGCCTAGGTCGTGGGGAGAGGCATGCGCCCTGATTCCCAAAGTCCTGAACGAC
GTCATGTTGCTGTTTCCGCTTCCATGCAGCGGGAGGCACGAGAGAGCGGCTGCTGTGGCAGCAGCGGCGTAGGAGCTACTAGATCC
TCTGCCAGGGAAAACTCCAGCGAGACCCATACGCATAGCGCGTTTGGCAAGCGTTCTCTCGCGTTTATGAGCGTTTTGGTGACCGC
CAAGAGCCTGAGAGCTGTAAAACTTCCGTTGACAATAGTTGCAAGAGAAGACCCTCTTCGATACAGATGGTTGCTGTTGCTCCGGA
TTGCTAATTTCGCTGGTGCTTGAAATTGGCAGCGTCAAAGAAGATGATTCAAGATCCAAGTTGTTGTTGTTGTTATTGAAACAGAG
GCTAAGATCCAGAGAGATTGACTTGTAATCGTCTCCAACAGGAGACAAGTTCGAGGCAACTTGGCTACTGGCACTGTCTGAATGAT
CATGTTCCGATGAAGCTTCAATCTCGAGGTTGAAGATAGGTCTCATCATTTCGGCAGAACTTGACGGTTGTTTTATCTTTTTCTGC
AATGATTTAATTAGGAAAGAATTTTAAGAATGTCTAGATGAGTTATGATTGAGAATTATAGGAAGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_176788 zinc finger protein 4 [Arabidopsis thaliana]10783e-115
XP_002888482 hypothetical protein ARALYDRAFT_475716 [Arabidopsis lyrata subsp. lyrata]10416e-111
AAA87300 zinc finger protein [Arabidopsis thaliana]9422e-099
ACU21215 unknown [Glycine max]4053e-037
XP_002527542 zinc finger protein, putative [Ricinus communis]3614e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q39263 Zinc finger protein 410781e-116
Q42485 Zinc finger protein 12591e-021
Q39261 Zinc finger protein 22017e-015
Q39266 Zinc finger protein 72017e-015
Q39262 Zinc finger protein 31936e-014

TrEMBL top hits (Blast detail)Scoree value
Q0WLF4 Zinc finger protein ZFP410782e-115
C6THB3 Putative uncharacterized protein4052e-037
B9SNH3 Zinc finger protein, putative3613e-032
B9HVS1 Predicted protein3595e-032
C6TK52 Putative uncharacterized protein3579e-032

Arabidopsis top hits (Blast detail)Scoree value
AT1G66140.1 ZFP4 (ZINC FINGER PROTEIN 4); nucleic acid binding / transcription factor/ zinc ion binding10799e-118
AT1G80730.1 ZFP1 (ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding2591e-022
AT1G24625.1 ZFP7 (ZINC FINGER PROTEIN 7); nucleic acid binding / transcription factor/ zinc ion binding2016e-016
AT5G57520.1 ZFP2 (ZINC FINGER PROTEIN 2); nucleic acid binding / transcription factor/ zinc ion binding2016e-016
AT5G10970.1 zinc finger (C2H2 type) family protein2016e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  60%
 
91  20%
 
181  20%

Unigene MembersMember information