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Information for unigene UN33268
| FASTA Sequence |
| Unigene ID: UN33268 | Length: 1235 |
SSR | | GGCTGAACACACACACACGAAAGGAAGAAGAAGATGGAAGCGAAATATGATCGTGCTAGTGAATTAAAAGCTTTCGACGAAATGAA
ACTCGGAGTAAAAGGTCTCGTCGACGCCGGAATCTCAACGATCCCTCGTATATTCCACCACTCGCATCTCAGTTCAACCGACCAAA
CTCCACCACTTCCCTCGTCAACGATGACAATCCCAAAAATCGATCTCGGAGGTGGCGTGTTCGAGTCCACAGCCACGCGAGAGAGC
GTCGTCTCGAAGGTCAAAGAAGCGGTGGAGAGATACGGGTTCTTCCAGGCGGTAAACCATGGGATACCGATTGATGTTATGGAGAA
GATGAAAGATGGGATTCGTGGGTTTCACGAGCAATATCCAGACGTGAGGAAGAAGTTCTATAGCCGTGATTACGCCAAGAAGGTTA
CTTATAGCAGCAACTTCGATCTCTATATTCTGCATCTGCGAACTGGAGAGATACTTTAAGTTGTTTTATGTACCCTGATGCTCCCC
AACACAGAGGACTTGCCTGAGATTTGTGGGGAAATCATGTTGGAGTATTCAAAGAGAGTGATGGAACTTGGGGAACTAATCTTTGA
GCTTTTATCCGAAGCTTTAGGGCTGAATCCTAACCATTTGAAAGAGATGGATTGCACAAAGGGTTTGTTGATGCTCTCTCATTACT
ACCCGCCTTGTCCTGAGCCTGATCTAACTTATGGCACAAGCCCGCATTCAGACAGATCTTTTCTCACTATTCTTCTTCAAGACCAC
ATCGGTGGGCTTCAGGTTAATCAAAATGGTCACTGGGTCGATGTTCCCCCTGTTCCTGGAGCTCTTCTCGTCAACCTCGGAGATCT
CTTACAGCTTATAACTAACGACAAGTTTTTGAGCGTGGAGCATAGAGTTTTGGCTAACAGAGGTGAAGAGCCTCGCATTTCTGTCG
CCTCTTTCTTTGTGCATCCTTTACCAAGTTTTAGAGTATATGGACCAATCCAAGAGCTTTTGTCTGAACAAAATCCTCCCGAGTAC
AAAGACACCACCGTCACTGAGTATTCAAAAAAATATCGCTAAAGGACTTGACGGTAAATCTGTGTTGCTTCAGTTCAAGATCTGAT
AAAAACTGTTTTCTAACGGTTTTTTTCACTTGATTTCTCTGTATCTTATAAAATAAGTTTATTGCACAATCAAACAAATAAAGTAT
GTTGTAGTCTGAGGCTATTACACAAATAGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002881136 hypothetical protein ARALYDRAFT_482001 [Arabidopsis lyrata subsp. lyrata] | 1393 | 1e-151 |
| NP_180642 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 1380 | 3e-150 |
| NP_180641 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 1233 | 4e-133 |
| ACR10277 2-oxoacid-dependent dioxygenase [Brassica rapa subsp. pekinensis] | 1169 | 9e-126 |
| NP_180115 putative 2-oxoacid dependent dioxygenase [Arabidopsis thaliana] | 1135 | 8e-122 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SKK4 Probable 2-oxoacid dependent dioxygenase | 1135 | 4e-123 |
| Q9C5K7 1-aminocyclopropane-1-carboxylate oxidase homolog 2 | 1085 | 2e-117 |
| Q8H1S4 1-aminocyclopropane-1-carboxylate oxidase homolog 4 | 1077 | 2e-116 |
| Q84MB3 1-aminocyclopropane-1-carboxylate oxidase homolog 1 | 1070 | 1e-115 |
| O04847 Deacetoxyvindoline 4-hydroxylase | 858 | 5e-091 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O80851 Putative dioxygenase | 1380 | 2e-150 |
| O80850 Putative dioxygenase | 1233 | 2e-133 |
| C5H9Q8 2-oxoacid-dependent dioxygenase | 1169 | 6e-126 |
| Q9LR82 F21B7.3 | 1031 | 7e-110 |
| Q43383 2A6 protein | 1014 | 6e-108 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G30840.1 2-oxoglutarate-dependent dioxygenase, putative | 1380 | 1e-152 |
| AT2G30830.1 2-oxoglutarate-dependent dioxygenase, putative | 1233 | 1e-135 |
| AT2G25450.1 2-oxoglutarate-dependent dioxygenase, putative | 1135 | 3e-124 |
| AT1G06640.1 2-oxoglutarate-dependent dioxygenase, putative | 1085 | 2e-118 |
| AT1G06650.2 2-oxoglutarate-dependent dioxygenase, putative | 1077 | 2e-117 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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