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Information for unigene UN33378

FASTA Sequence
Unigene ID: UN33378Length: 1502 SSR 
CAACAAAACATCTTCAACTTGTTAAACCAACAAACCAATTTTTTTATCTTCTGATACAAAGAAACTAAAAAGATTTAAAACTCAAA
AACTCGAAGCTCGACCATGCCTTCTTTTCTCTTTGGTAAATACCAAGCCACGACCTTCCCAGAATCGAGAAGCCTCAACGAGTAGT
TCAAACTGTAAACCAGATCTTCCATTTGTGCACCGTACTTCCCTGCACCAACCTCAAACTGCGAGTCCACTTTGAAAACAATTGGC
CCTGCAACCTGTTGCTGGAATATAAGGCTGAGCCTGGGAGAACTTGCTGATGTAGCGTCATCATCTGTTTTCTCACTCCCTGAAGA
TCTTCTGATTGCGTGAAAGATTCTTTTAGCAAGAGCTGAAGCTGAGGAAACGTCCACACGAGCATCTACTCTCGTTAGATCACCAT
ACAGCTTACTAAACCGTCCTTTCTGAAACGTACAACAAGCAGAACCAAACACATCTGCGCTTATCAAACTCCTCTTCATGATGATG
TCTCGCCCTGTAATCCAAGCTGCCAAGCTGCTACCTACTATTCCTGAAACTGCTGCGTGAGGCTCCTTGAGGCGTAAATCGTAAGG
AAGAAAAACAGGTGAATCATCATCATCATCTTCTTCTTCTTTCTCTTCCGGCCTCCACAGGACTCTCTTAGACTTGTATGAAACCG
CAGCCTTGGCGCATAAACCAGGCATCAAAGAAGCAGGAGGAGCACCGCCGCCACCACTACTCTCAGCAGCGTTCACTTCCAGAGGA
TCACCTTTGCTTTTGTGTACACCGAAACGGTAGTGAAGCCCGGTCGTCTCTGGAGCAAGAGACGAGACATCAAAGTTTAACGACTC
GGGAACATCCCAGAAGCGTCCTTTATGGTCCAAAAACAAGTCTGGCCAAGCTGCTTCCACAGTGAGATCATGTTTCTCAAGCGGAT
GAACAAACATTAACTTCTTTCTGATCCCGTCTTTATCGCCGAGACGCTCAGCGCTCAGCAAGAGAGAGGAAGAAGAGCCTAATGCA
ATCTGAGTCCATAGACCAACTGAGTAAAGAGACTTGTCTACAATGTGTTTTGTTGTGTTTTTGAAAAGCTGTAGATCCAACTCCTC
TGCCTTGCTGATACTAGTTTTGATATCAGCAAAGAGCTTCTTTGGCTTGAACTGCCCAACCAATCCTGCCCACCAGTTGGAAGAGG
AAGGAGAGAGCAAGAGAGAGTTGAGAGAGAAAGAGCCGAGTCTCTTGTCGGAAGAAGGACCAAAAGCAGGGATGACTCCGAGGGGG
AAACCTTCGCGGAGAAGAGAGAGCTGCTGAATGCGGTGAGAGCGGCTGGCTCTTGCGCCGTCGACGGGAAATGGCTCGCCGGGAAC
AGAGCGAGCTGTGCCTTGGAGGGTTTGAGGTGAAGAAAGGTTCTGGTCCCAGAACACTGAGTCAATTGCTGAGTTGAGATTCGCCA
TTTTCTACTTCCTCTCCTCTTCTTTTCCTTATCTCTGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880127 hypothetical protein ARALYDRAFT_483595 [Arabidopsis lyrata subsp. lyrata]18922e-209
AAK83606 At2g44640/F16B22.13 [Arabidopsis thaliana]18473e-204
NP_566021 uncharacterized protein [Arabidopsis thaliana]18473e-204
XP_002265990 PREDICTED: hypothetical protein [Vitis vinifera]13482e-146
XP_002327064 predicted protein [Populus trichocarpa]13034e-141

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O80503 Expressed protein18472e-204
Q94A95 At2g44640/F16B22.1318472e-204
B9MVB9 Predicted protein13032e-141
B9SKH1 Putative uncharacterized protein13005e-141
B9HXB0 Predicted protein6204e-062

Arabidopsis top hits (Blast detail)Scoree value
AT2G44640.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plasma membrane, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PDE320 (PIGMENT DEFECTIVE 320) (TAIR:AT3G06960.1); Has 25 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).18488e-207
AT3G06960.1 PDE320 (PIGMENT DEFECTIVE 320)6301e-065
AT3G06960.2 PDE320 (PIGMENT DEFECTIVE 320)4661e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information