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Information for unigene UN33422
| FASTA Sequence |
| Unigene ID: UN33422 | Length: 532 |
SSR | | GGGAGTATGAGACTGAGAAGGAGAAAACGAAGTGTGTCTCATACAGAGGAGGCAAATCATCGGGAAGAAGAGTTTGAAGAGCAGAG
GAGTCCTGACAAGAGAGAACGGTCTTATCACAGTCATAGAAGACGCAGCAAGGACAGAGAGTAGCGTTACAGAGTAGAGTCTCGAT
CTGACAGAGAAGAGAGAAAAGATAGATCAAGAGGAAGGGAAGATAGATATGGTGACGACAATGAAGAAATTTCTGGGAGCAAAAGA
TCAAACCGTGGAGAAGAAGAAGAACGTTCTCACAAACGTCATAAACACAGGCGTTCTCATCATCATAGGAGGTCTTCTAATTGGGA
TATTCACTCTTCTGACACTGAATTTTATTAAGGATCAGCGAGAGAGAGAGAGATGTCCCCAAGAGTCTCCTCGAAGTGCATGTGCT
TGATAGTTTTAGTATTTGGAACTCTTATTATTAGGCTTGCCGATTGTATATTTTAAGAAACCATCACAAAACGAGTGCCATGATAA
GGTAATTACAAATCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880039 hypothetical protein ARALYDRAFT_483444 [Arabidopsis lyrata subsp. lyrata] | 301 | 8e-026 |
| BAC43032 putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis thaliana] | 281 | 2e-023 |
| NP_850395 U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis thaliana] | 281 | 2e-023 |
| AAB64330 putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis thaliana] | 196 | 1e-013 |
| EEE23942 hypothetical protein TGGT1_030230 [Toxoplasma gondii GT1] | 141 | 3e-007 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84UQ1 DEAD-box ATP-dependent RNA helicase 42 | 130 | 3e-007 |
| P30651 Uncharacterized protein ZK643.5 | 120 | 4e-006 |
| Q66II8 U1 small nuclear ribonucleoprotein 70 kDa | 119 | 6e-006 |
| Q6P7Y3 Pre-mRNA-splicing factor 38B | 117 | 1e-005 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GX59 Putative U1 small nuclear ribonucleoprotein 70 kDa | 281 | 1e-023 |
| Q8VY74 Putative U1 small nuclear ribonucleoprotein 70 kDa | 281 | 1e-023 |
| O22851 Putative U1 small nuclear ribonucleoprotein 70 kDa | 196 | 8e-014 |
| B9PQL9 Putative uncharacterized protein | 141 | 2e-007 |
| B4Q668 GD23040 | 136 | 8e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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