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Information for unigene UN33427

FASTA Sequence
Unigene ID: UN33427Length: 789 SSR 
GATGGGGAGCTGGAATCGGATGCAGTTACAGAGTTGAGCGGTGCTATATACTGAAGAAAGGAGGTGGTACTATTGAACTCGAACCT
TCTCTTACCCACTCCTCAACTGTTGAGCCAACACTTTCACCAATGGCTGTTGAGAGGTCTATGACCACCAGAGCAGCAGCTTCGAA
TGCTCTGCGGCAACAAAGGTTTGTTCGAGAAGTAACAATACAATACAACCTCTGCAATGAACCTTGGATCAAGTATAGCATAAGCA
TTGTGGCCGATAAGGGTCTCAAGAAACCTCTCTTCACCTCTGCCCGCTTGAAGAAAGGGGAAGTTTTGTACTTAGAAACACACTCA
TGCAGGTATGAGTTTTGTTTCGCGGGAGAGAAGACTATGAAAGCATTCCAAGCCTCACAACAACAACAACACTTGTCACAAGAAGC
TATGGAGATCGATAAGAACAACAAGTCGCAGAACCATCTTCCTTTTTCAAACGGTGACAAAACAGAATCAGACAACAGTATAATAG
ATGTTTTCCGTTGGTCGAGATGTAAGAAACCTCTCCCGCAGAAGCTTATGCGGTCTATCGGGTTTCCACTCCCCCCAGATCATGTC
GAGGTGTTGGAGGAGAATCTTGATTGGGAAGATGTACAGTGGTCACAGACTGGTGTTTGGATTGCTGGAAAGGAGTACACTCTTGC
TCGCGTGCATTTCTTGGCTCCCAATTAAAAAAAAAACTTTCATGTTTAATGTGTCCGTCTTTATTTGATCTTTATTGTTAAGACTT
AAAAAGATTAATGGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196462 uncharacterized protein [Arabidopsis thaliana]11391e-122
XP_002873360 hypothetical protein ARALYDRAFT_487684 [Arabidopsis lyrata subsp. lyrata]11337e-122
XP_002267563 PREDICTED: hypothetical protein [Vitis vinifera]8918e-094
CBI27708 unnamed protein product [Vitis vinifera]8918e-094
NP_001059629 Os07g0477500 [Oryza sativa Japonica Group]8433e-088

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8RWV9 Putative uncharacterized protein At5g0845011399e-123
B8B602 Putative uncharacterized protein8711e-091
B9FX69 Putative uncharacterized protein8711e-091
Q0D6I0 Os07g0477500 protein8711e-091
C5YKL2 Putative uncharacterized protein Sb07g0193508584e-090

Arabidopsis top hits (Blast detail)Scoree value
AT5G08450.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 32702 Blast hits to 18312 proteins in 878 species: Archae - 45; Bacteria - 1760; Metazoa - 16233; Fungi - 3347; Plants - 1326; Viruses - 208; Other Eukaryotes - 9783 (source: NCBI BLink).11404e-125
AT5G08450.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 32702 Blast hits to 18312 proteins in 878 species: Archae - 45; Bacteria - 1760; Metazoa - 16233; Fungi - 3347; Plants - 1326; Viruses - 208; Other Eukaryotes - 9783 (source: NCBI BLink).11404e-125
AT5G08450.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylation protein Rxt3 (InterPro:IPR013951); Has 32702 Blast hits to 18312 proteins in 878 species: Archae - 45; Bacteria - 1760; Metazoa - 16233; Fungi - 3347; Plants - 1326; Viruses - 208; Other Eukaryotes - 9783 (source: NCBI BLink).11404e-125

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information