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Information for unigene UN33435
| FASTA Sequence |
| Unigene ID: UN33435 | Length: 1031 |
SSR | | GGGCGAGTAGAGAGGGAGATAGAGAGAGAGAGATGAACTCGTCGCCGGCGATTGAACCAGACGTCCCGGACCTCGTTTGCCAGCTC
GATAATGTCCAAGGCATGGTAGATGCCCTCACTTGCGTCCGATGGAAACGCCACCAGGATGCTTTAGTGGAGTTATCCGAGCACGG
AATCGTCTTGATCGTTGAGGAATCAGGCTGTCTTCAAGCCAAGGTCTATCTTCAACGCGAGCTATTCACGAAGTACGAGTACGGAG
CTGAAGGGAGACCGAGATTTGGAATCAGCTTAGGGCTTCTTGTGGATTGCTTGAACACATTCTCATCACCTGGACATTCAAATACT
ATAGAAATCAAGTATCCAGGCCCTGACATGGAGCTTCTTCTCAAGTCTGTTGATACTCTGAACTCATGCATCTACTCTGAGATAAG
AACGAGGATCCCAGAGACTAGTGAATGGGACTATAACTTTGAGCAGGCTGGAACCTCGCCACTTACTTTTACCGTGAAGTCACGGC
GTTGAAAGAAGCTATTGATGATCTTGAGTGGCCTGGATCAGGCGTGCAGATTAGCCTTCAAAAGTCTCCTCCTTGTGTTACCTTTA
GAGGAGAAGGACATTGAGACTTGCAGATAGACTTCATGTATTATGCCAACACAGATCTTCTCCTTGCCTTTCATTGCGATACTGAA
GTCTCTTACAGGTACAAATACAAGTTCTTGAAGGCGACAACAGCAAATATTCCTGGAAACGTCGCGAGGGAAAACAGGGGAAGTAA
GCTGACAATAGGGAGAGGAGGGATGTTGAAAGTTCAGCACTTGGTTTCGGTTTCTAAACCGTTAGCTCCACAAGTGGATTCTGCAG
GTTATCAGCCGCCGAGTCGGATTGCTTATATAGAGTTCTTTGTCAAGCCTGAAGAAACTGCTTAGTTTACAATCTTTTTCTGTTGG
TCCAACAGATTGCTAAAAGGCTTTGCAAAGAAAAGAAAAAAAGTGTAATTGGAGACTTATGTGTTGTTTTTGATCGTTTAGCCCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABD65164 hypothetical protein 40.t00049 [Brassica oleracea] | 828 | 2e-086 |
| NP_193511 cell cycle checkpoint protein [Arabidopsis thaliana] | 804 | 2e-083 |
| XP_002870087 damaged DNA binding protein [Arabidopsis lyrata subsp. lyrata] | 802 | 3e-083 |
| XP_002326739 predicted protein [Populus trichocarpa] | 684 | 1e-069 |
| XP_002527664 rad1 DNA damage checkpoint protein, putative [Ricinus communis] | 674 | 2e-068 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2A971 Putative uncharacterized protein | 828 | 2e-086 |
| Q8L7G8 At4g17760 | 804 | 1e-083 |
| B9MU53 Predicted protein | 684 | 9e-070 |
| B9SNU5 Rad1 DNA damage checkpoint protein, putative | 674 | 1e-068 |
| B8B283 Putative uncharacterized protein | 662 | 3e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G17760.1 damaged DNA binding / exodeoxyribonuclease III | 804 | 6e-086 |
| AT4G17760.2 damaged DNA binding / exodeoxyribonuclease III | 660 | 3e-069 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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