 |
Information for unigene UN33443
| FASTA Sequence |
| Unigene ID: UN33443 | Length: 822 |
SSR | | AGATTGTTTTCTTCCTTTACTTCTTTTACTTTATATTCTTCTCTGGTAGATTATCTACCAGAGATATTATCGAGCCGTGTTTATTT
TGTATCATCTCTTGTTAAAATTTATTTATATCTCCGGAGGTCGAGTTCTTGATCGGTGTTAAAAGAAAGTCCAAGAAGATGTGGTG
GATGATGGGTGAAACCGGTGGTCCCTATTGTTCTAAAAAATCGATGATCTATGCGGCACACAGGAATCAGATCGAGGCTTTGGCAT
CACCAGACTATGTTGCATTTTGCGTGGTATAGATTTAAAGTCGATCATATTCCTATTAGTAATCGTCCCACTATGTTTTATCGGTG
TATACATTCACGGCCTCAAGATCTCATACTTCTTGAGACCATTATGGGAATCACTACCAAAACCATTCCACGAGATTCCTCACTAC
CACCACGAGAACGCTTTTGATACGTACGAGTCTCGTGGGCCTCCTATCCTATATCAGTACTACAGAAAGAATAAGGGAAGGAATGG
GCCTACTGGGGCACCAGCATGATTGATTGATGAGTGACGGATCCTAGGAGGTGAGGTGGCATCCTTCTAGAAACAGAATCTTCAAA
TAACCACCTGAGGCAACTTGTCACGTGCAGTGGATAACGGCTCGAGAGTGACGTGCTGAGTCATTTACTTTTCATGCTATTTAGAT
GCGTTGTAGAGAGAGAGAGAGGCTATCGAGTGTTTGAGTCGATCATTGTGTAGGAGCTGAGAAATCTCCTGTGAAACTTTCTCTTT
GCTGTAACACTTGATCGATTGAGCAATAATACACTTGTTTCTCTTTTG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002888633 glycosyl transferase family 17 protein [Arabidopsis lyrata subsp. lyrata] | 390 | 1e-035 |
| NP_176955 beta-1,4-N-acetylglucosaminyltransferase like protein [Arabidopsis thaliana] | 386 | 3e-035 |
| AAD31053 Contains similarity to gi|4417304 F15O11.7 putative beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase from Arabidopsis thaliana BAC gb|AC006446 | 308 | 3e-026 |
| NP_172759 beta-1,4-mannosyl-glycoprotein [Arabidopsis thaliana] | 308 | 3e-026 |
| BAE98988 beta-1,4-N-acetylglucosaminyltransferase like protein [Arabidopsis thaliana] | 308 | 3e-026 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C9V4 Putative uncharacterized protein At1g67880 | 386 | 2e-035 |
| Q0WV60 Beta-1,4-N-acetylglucosaminyltransferase like protein | 308 | 2e-026 |
| Q9SAD5 F3F19.2 protein | 308 | 2e-026 |
| B9S665 Acetylglucosaminyltransferase, putative | 271 | 5e-022 |
| C6T7I8 Putative uncharacterized protein | 268 | 1e-021 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G67880.1 glycosyl transferase family 17 protein | 386 | 1e-037 |
| AT1G12990.1 glycosyl transferase family 17 protein | 308 | 1e-028 |
| AT3G01620.1 glycosyl transferase family 17 protein | 261 | 4e-023 |
| AT5G14480.1 glycosyl transferase family 17 protein | 252 | 4e-022 |
| AT3G27540.1 glycosyl transferase family 17 protein | 224 | 8e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
