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Information for unigene UN33449

FASTA Sequence
Unigene ID: UN33449Length: 1349 SSR 
GGGAGAATGACGGTATCCTATCTTCCAAACGATTTGGAATCTGAGATACTCTTTAGGGTTCCGGCAAAATCTCTATCGAGATTGAA
AACGACATGCAAACGATGGTACGCTCTATTCAGAGATTCGAAGTTCGTGGTGAAGAACAAGAAATTAGGTAGAGCTGTAAGAGAGA
CGATTTTACAGACCTATGACGGTGATGTTTATTCAGTCGCCGGAGATCTCCACAATACCGTTGTCAATACACCTGTCCAGGTCTCA
GGTAAACTTACAAGTCTAAAGGGTTCAAATGATTTGAACTTCTCTGAGATATTTCACTGTAACGGTTTAATGTTGTGCTCTGCAAA
TGGAAATGATAGACTTGTGGTTTGGAACCCATGTACTGGCCAAACGAGGAATATCAAAGCAAGAACTTGTTTCCAGACTAATTTAA
CCTATGCTCTAGGATACAGCAGATGCTCTTCTTCTTCTTCTGGCCATGTCTACAAAATCTTGAGGTGTTTCGATTATCGAAACGAT
CAGGAAGAGTGGGTTCCTCAGTGTGAGATCTATGAGCTTAGATCTGATTCTTGGAGGGTTCTCGATTCCTTCCCTCTTCACTACAT
CATGTTTCGGGATGGCATATCTTTGAAAGGAAACACTTATTGGGTTGCTGGAGATAACGAAAGTGGCTATTTCTTGCTCAAGTTTG
ATTTCACCACAGAGATATTTGTGCGTCTCCCTCTTCCGATTCCGATTCAGACAGAGAGATTTGTGAGTAGATTTGTTCTTTCAGTT
GTCAGGGATGAAAAGCTCTCGGTGTTACAAATTGTGGACAATTCAGATGTCATGTTATATGGCTGGTCAAATGTGATGAGAATATG
TGTGAGCAATAAAATTAGTGAGGATGCTAATAAAGACTTGTCGTGGAGAAGCGACTTGTTCTTGGAAGTTGATTTTGATAACTATA
ACACGTATTTCCGAAGCTTCTTGTTGGACGAGGAGAATAAAGTGGCATTACTGTGTTGTTCTATAGAAATGGTAACAGATGATTCT
ACGACCATAATATACATTATTGGAGAGGACATGCTTAAAGAAGTTTATAGATGTACTATAGAGGAATCTCGTTCCAACTCCCCCCT
TGTCATCACTTATGTTCCAAGCTTGGTTCACATTTAGAAAAGAGGGCAAATAAATGGAGGTTAGCCCTTAAATGAATTACTTTCTT
TTTTAGGTGTTGGCGATCTTCTGGTTTGTACGTACTTTTGGCTGATGCTTGATAATGATTTTTTCCGTTCCTCTTTTTTTTTCTCT
GTGCTTTTGGGTATTGTTCAAGTACATTGTAAATTCTGCTTATAGCCATGTTCACTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAB02042 unnamed protein product [Arabidopsis thaliana]7406e-076
NP_188380 F-box and associated interaction domain-containing protein [Arabidopsis thaliana]7381e-075
XP_002878762 predicted protein [Arabidopsis lyrata subsp. lyrata]7164e-073
XP_002883065 F-box family protein [Arabidopsis lyrata subsp. lyrata]6537e-066
NP_188381 putative F-box/kelch-repeat protein [Arabidopsis thaliana]6261e-062

Swiss-Prot top hits (Blast detail)Scoree value
Q9LUP5 F-box/kelch-repeat protein At3g175307403e-077
Q9LUP4 Putative F-box/kelch-repeat protein At3g175406264e-064
Q9ZV78 F-box protein At2g071404948e-049
Q9LXQ1 F-box/kelch-repeat protein At3g441204859e-048
Q9LUU3 Putative F-box/kelch-repeat protein At3g172804697e-046

TrEMBL top hits (Blast detail)Scoree value
Q9ZQ17 Putative uncharacterized protein At2g245105334e-052
Q9LUI9 Gb|AAD25583.14457e-042
Q84V15 At2g187804091e-037
Q9ZV41 Expressed protein4091e-037
Q4PSN2 F-box family protein3911e-035

Arabidopsis top hits (Blast detail)Scoree value
AT3G17530.1 F-box family protein7384e-078
AT3G17540.1 F-box family protein6264e-065
AT2G24510.1 F-box family protein-related5332e-054
AT2G07140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), F-box associated (InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G44120.1); Has 760 Blast hits to 739 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 760; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4902e-049
AT3G17280.1 F-box family protein4696e-047

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information