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Information for unigene UN33493

FASTA Sequence
Unigene ID: UN33493Length: 824 SSR 
GACTCTTACTGGAACAGTTGCCAAAGTTATGTAATGACAAAAGGTTGGAGCCGCTTCGTCAAAGACAAGAAGCTTGATGCTGGCGA
CATCGTGTCTTTCCAAAGAGATCCTGGTAACAAAGACAAGCTTTTCATTGATTGGAGGAGACGACCAAAGATTCTAGATCATCATC
ATCAAACTGCTTATCAATTCTCCGGAGCTGCGTTCCCTAGGTTTTACTCCTTCTCCAATCCTCTGAACCTTTATCATCGATATCAG
CGAGATCTTGGAATTGGGTATTATGTGAGGTCAATGGAGAGAAATGATCCAACGGCTGTAATTGAATCTGTGCCGGTGATATTGCA
AAGTAGAGCAGCACACGTGGATGCTATAGCTTCATCAAGTGGAGAGAAGAGGTTAAGGCTGTTTGGAGTGGATATGGAGTGGGGCG
GAGGAGGAGGAGGAAGCGTGAATAGCACAGAGGAAGAGTCATCGTCCTCCGGTGGTAGTATGTCACGTGGCGGCGTTCCTATGGCT
GGTGTTGGTTTTCATCTGCAGTTGAGGTTAGTGAGCAGTGATGATGAGTCTTTATTAGCAATGGAAGCTGCAAGTGTCGATGAGGA
TCATCACTTGTTTACAAAGAAAGGAAAGTTTTCTTTGTCTTTTGATGATTGACTATGAGATTGATCACTACTTTAATACACGTTAT
ATATGATAATTATACATATTATATATATGTGACACAAGGATGTCGTTCAAGATTTAGTGATAATATTAATAAATGTGATGTGTTCT
TGGCAAAGAAAAAAGAATTATGTTCTTAAGTTCAAATCTGGTTACAACCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876649 hypothetical protein ARALYDRAFT_486704 [Arabidopsis lyrata subsp. lyrata]8318e-087
AAM67302 RAV-like protein [Arabidopsis thaliana]8139e-085
NP_191756 B3 domain-containing transcription factor NGA2 [Arabidopsis thaliana]8041e-083
BAC42301 putative RAV [Arabidopsis thaliana]8003e-083
XP_002275955 PREDICTED: hypothetical protein [Vitis vinifera]2072e-014

Swiss-Prot top hits (Blast detail)Scoree value
Q9M268 B3 domain-containing transcription factor NGA28045e-085
O82799 B3 domain-containing transcription factor NGA12973e-026
Q9MAN1 B3 domain-containing transcription factor NGA32221e-017
Q8LMR9 B3 domain-containing protein Os03g01209002086e-016
Q7F9W2 B3 domain-containing protein Os04g05814002061e-015

TrEMBL top hits (Blast detail)Scoree value
C3VMM3 NGATHA28047e-084
D4HU08 NGATHA13039e-026
C3VMM2 NGATHA12966e-025
B9RYX9 Transcription factor, putative2365e-018
A5APE8 Putative uncharacterized protein2268e-017

Arabidopsis top hits (Blast detail)Scoree value
AT3G61970.1 NGA2 (NGATHA2); transcription factor8044e-086
AT2G46870.1 NGA1 (NGATHA1); transcription factor2973e-027
AT1G01030.1 NGA3 (NGATHA3); transcription factor2221e-018
AT5G06250.1 transcription factor1952e-015
AT5G06250.2 transcription factor1952e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information