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Information for unigene UN33502
| FASTA Sequence |
| Unigene ID: UN33502 | Length: 1374 |
SSR | | GTATGTCAGCTTTCTCCTCACCTTGAGGTTTCTTGGTTCCTCTCAGTTACCTCGCACTGAGGTTGTGAAGAAAATGTGGGCATATA
TTAAAGAGAAAGACTTGCAAGACCCAAAGGATAGAAGGAAGATACTGTGTGATGAGTCTCTGCATTCCTTGTTCCATGTCAAGTCC
ATTAACATGTTTCAAATGAACAAGGCATTAGCCAAGCATATCTGGCCCTTGGGTGATGGAGGAGGAGCAGATGGGTGTGTAACCAG
TGTGAAAGAAGAAGAAGAAGATGAAGGTGATGCATCAGGGGAAAGAGACGAGAAAGAGGACAAAAACGAAGAAGTGGAAGAGGATA
ATGAAGAAGAAAGTGAAGAGGAAGTCAGGAGTCTGCGTAAACGCAAGAGAAAGAAGCCAGCCAAGTCCGAGGAGAAGCCCAAGAGG
AAAGGAGGTGGTGGATTTGCTAAAGTTTGCAGCCTCTCGCCAGAGCTTCAGGCTTTTACTGGGATGACAAAATTAGCCAGGACAGA
GGTTGTGAAAATGCTTTGGAAGTACATAAAAGAGAAGAATTTGCAAGATCCGAAGGATGGACGCACAATCATCTGCGACGAATCAT
TGAGATCTCTGTTCCCTCTCGAGTCCATCAATATGTTTCAAATGAATAAACATCTAACCAAGCACATATGGCCTTTAGAGGATAAT
GCAGGAGAATCAGCTGGCTCTAGCTCTCCGAAAAATGGAAAGCTAAAAATGGAAACAGAGGACGGAGACACAGAGAGTGAAGAACT
AAACGAGAATGAAGAAAAGCCAAAGAAGGAAGGTAGTGGTCTTCTTGCTCCACTTCCACTTTCAGATGCTCTTATCAAGTTCTTGG
GTGATGGAGGAGAAAGCTCTTTGTCGAGGGCAGATGTGGTAAAGAGATTGTGGGAGTACATAGAACAGAATGATCTTCAGGATCCT
TCTGATAAGAGGAGAATCATATGCGACGAGAAGCTGAAAGAACTCTTTGAAGTTGATTCATTCGAGGACATATCAGTCTCGAAGCT
CCTGACCAGCCACTACATCAAGATCGAACAATGACTTTGAAGCCCTCTTTCAAAAGCGGATGGGAGACTTTTTATTCGGAACAGTA
GAGGTCGGTTCAGGACTTTAAACTCGGCAAAGCCATAGAGTCAAAAGACTAAAAAGGTAATTGCATTTTGAGACTTGGAAGCATAT
GCGTTTTCTGAATTTGCTTGCAAGTGCATCCTTTTGAAGTGATCTCAAATGTTGTCTTTTTGGTATATAGTGACAAAACTAGAATG
GATATGTTTTGAGACAAAACTAATTGTTTTAATCATTTCCTCTTTTTTATCGTAGACAATAAAAGTACACATCACTTTTGTCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB01706 unnamed protein product [Arabidopsis thaliana] | 1365 | 2e-148 |
| XP_002883161 SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 1354 | 4e-147 |
| NP_188538 SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] | 1347 | 3e-146 |
| XP_002521839 brg-1 associated factor, putative [Ricinus communis] | 968 | 2e-102 |
| NP_175375 SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] | 896 | 5e-094 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q05024 Protein TRI1 | 246 | 5e-020 |
| O74503 Upstream activation factor subunit spp27 | 239 | 3e-019 |
| Q08747 Upstream activation factor subunit UAF30 | 169 | 4e-011 |
| Q54F38 Histone H3.v1 | 125 | 5e-006 |
| P13383 Nucleolin | 124 | 7e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LJ56 Gb|AAD43149.1 | 1365 | 1e-148 |
| B9S770 Brg-1 associated factor, putative | 968 | 2e-102 |
| Q501B9 At1g49520 | 896 | 3e-094 |
| Q9XIB9 F13F21.4 protein | 880 | 2e-092 |
| B9HRW3 Predicted protein | 787 | 1e-081 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G19080.1 SWIB complex BAF60b domain-containing protein | 1377 | 3e-152 |
| AT1G49520.1 SWIB complex BAF60b domain-containing protein | 896 | 2e-096 |
| AT4G22360.1 SWIB complex BAF60b domain-containing protein | 265 | 3e-023 |
| AT2G35605.1 SWIB complex BAF60b domain-containing protein | 189 | 2e-014 |
| AT4G34290.1 SWIB complex BAF60b domain-containing protein | 164 | 1e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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