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Information for unigene UN33561

FASTA Sequence
Unigene ID: UN33561Length: 1339 SSR 
GTCTCTCTCCGGGGTTCTATCTAGGAAGACAAAAGAGTGTGAAGCATTGCATCCGAGATCAGCTGATTATGCTTCTCAGCTATGTG
ACCTGAATGCTACGGTTCGTGATTTGAAGAATAGTCACGAGGAGTTGAAGTTGTTTCTGGACATGTATAAACGTGAGTCCACTGAT
CCGAGGGACATAGGTGAAGCCAAGGAAGAGGAGTACAGGGCTTGGGCTCATGTTGAGAGTTTAAAATCCTCTCTTGATGAGCAAAA
TCTAGAGTTGCGCGTTAAGGCAGCAAATGAAGCTGAAGCAGTTTCCCAACAAATGTTGGCTGCTGCGGAAGCTGAGATTGCTGATT
TAAGACAGAAGATAGATGATTGTAAACGGGATGTCGTAAAGCATTCTGATATCTTGAAATCTAAACATGAAGAACATGGAACATAT
CTTTCCGAGATGCAGGCAATTGGAAGTGCCTACGAGGACATTGTACCACAAAACCAACAACTTTTACTTCAAGTCACAGAGAGGGA
TGACTATAACATCAAGCTTTACTTGGAAGGCATAACTTCAAGGCAGATGCAAGATGCTCTGCTTATCGATAAATACATCATGGATA
AGGATATCCAGCAAGCCAGTGCATCTGCCAGCTTCCTCTCCAAAAAATCCTTAAGAATTGAAGATCAGATGAGGTTCTGCACAGAG
CAGTACCAGAGACTAGCCGAAGATAGATACCAAAAGTCTACAACTCACGAAATTCTGCAAAAGAAACGAGCAGACGTTGTGAATGG
CTTGGAACAAGCTAGGTCAAAGCTAGAGGAGTCACATTCTAAAGTTGAGCAAAGTCGGGTGGATTATGGGGCATTGGAACTAGAGC
TGGAGATCGAAAGGTTCAATAGGAGAAGTATAGAGGAGGAAGTGGAAACAGTTAAACCGAAAGTTTCTCGTCTTAGGTCTCTCGTA
GAAGGGTCATCAGCTATTCAAAAGCTCAGACAAGAGCTCAACGAGTTCAAAGAGATCTTTAAGTGTAAGGCCTGCAACGACCGCCC
AAAAGAGGTGGTGATCACGAAGTGCTTCCATTTGTTTTGCAACCCATGTGTGCTAAAGATCACAGGAACAAGACAGAGAAAGTGTC
CAACATGCTCGGCATGTTTCGGACCCAACGATATCAAGCCTATCTACATATGAGGGGATGTTGCAGCATGGAACAGGCAGTGACAC
TTTTGTTTTTGTAACTTTTTGGTTTGTTGCTTTCTCAAACTCTTCTTTCAGAGAGAGAGAGAGAAAATAGATTAAATATAGTTTAC
AAATCCGAATATACATTTTTAGCTCATTTATATATAGTACATTTGTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881991 histone mono-ubiquitination 1 [Arabidopsis lyrata subsp. lyrata]17721e-195
AAM14834 unknown protein [Arabidopsis thaliana]17505e-193
NP_182022 E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana]17505e-193
CBI16629 unnamed protein product [Vitis vinifera]11725e-126
XP_002274055 PREDICTED: hypothetical protein [Vitis vinifera]11035e-118

Swiss-Prot top hits (Blast detail)Scoree value
Q8RXD6 E3 ubiquitin-protein ligase BRE1-like 117502e-194
A2XW69 E3 ubiquitin-protein ligase BRE1-like 19472e-101
Q7XU27 E3 ubiquitin-protein ligase BRE1-like 19472e-101
A2ZAC2 E3 ubiquitin-protein ligase BRE1-like 26902e-071
Q336R3 E3 ubiquitin-protein ligase BRE1-like 26902e-071

TrEMBL top hits (Blast detail)Scoree value
B9GP99 Histone ubiquitination proteins group10407e-111
B9RD35 Protein binding protein, putative9521e-100
B9FGG6 Putative uncharacterized protein9474e-100
B9MV16 Histone ubiquitination proteins group8963e-094
B8Q8A6 SKIP interacting protein 208499e-089

Arabidopsis top hits (Blast detail)Scoree value
AT2G44950.1 HUB1 (HISTONE MONO-UBIQUITINATION 1); protein binding / protein homodimerization/ ubiquitin-protein ligase/ zinc ion binding17511e-195
AT1G55250.1 HUB2 (HISTONE MONO-UBIQUITINATION 2); protein binding / zinc ion binding6372e-066
AT1G55250.2 HUB2 (HISTONE MONO-UBIQUITINATION 2); protein binding / zinc ion binding6273e-065

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information