Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN33637

FASTA Sequence
Unigene ID: UN33637Length: 1253 SSR 
GTTAGCAAAGTGATTATATTTTAGTATTCCTCTGAAAAAGACACCTCCAATAAAAATAAAGAATCTAGCAAGTCTTTAACAAGCAA
AGAATCGGTTATACAAAAAAACATTTGATATACAAACAATGAATTACCCTTTCCAGTAAATAAAAAAAAAAAAAATATATATTTTA
AATGATTTTCTGTTTTTTTTATAGGTTATGATGTTTATCAGTAATGGCAATCCACCAAAGTAGGAGCAGACAAGAAAAGACACTTT
GGTTCTTCTCTTTGCTTCGTTGGTTGGTGTTCTTGTTCCTGTTTTTGCTTCAAAGCAAAGGTGAAACCGTTGACCCGATTCTCATC
TTCCGGTGCGGGTAGATTCAGATCCAAATCCAATGACACGACCGGCTTCTTAGCTCTCTTTGTAGCTGGCATCACCAGATGATCTT
GACCGTCAGATACTTGATCGAACGACATGGAAGACAGTGATAACTCCGTGTTAGCAGCAGCCATGGCCACCGTTACAATGTTAACC
GGTGCCGCAGCAACAACCACCGCGCCTCTATGCCGTCTCATATGGCCACCTAAGGCTTGCCCGGACGTAAACTCCGCCCCACAGAC
TCCACATTCATGAACCTTATTGCTACCTGCCTTACCATACACAGCAACCGATCTATTGTTATTGTTGTTGTTGTTGTTGTTGTAAA
TAGCTGAAGTTGTGACGAGTGAAACGGCTTCGCTTTCGTAGATGTTCTTCTTAACGTCAATGTTGGAGTATAAGGATAACGTGGCT
TTGGGTTTCCTGTGGCTAGCTCTATGGCCGCCTAAAGCTTGAAAAGAAGGGAAGGTCCGGTCACATGTTTTGCATTGATATACGTA
GTAACCGGCTTTGCCACCACCGTTAGATGAAGAAGTCTCTAGAAACCTCCTGCTTGGGACAAGAGGATCAAACAGTTGGCTATGTC
TTGCTCTTCCTCTTCTTCTTCAGCCTTCAATGTTGCGTTGTTGTTAGAGAACCAAGAGGCTGATGAAGATGAAGACGTGATCACAC
CATCCTTTTTAGACTCTTCTTCAATGTCGCGTGCATGGGAAGGAACTATAGGAGGGGAGATGGAGAAAGGAATAGGAGACTGTGGA
CGTTGTCGCTTTGTACGCTTCCCTTTAAAGATTAATGATTGCTCCTTTGAAGCCGCTATGGCCTCTTCAAACGCTTCCATCAAGAG
ATGAAGATCACTAAAGGAGAGGAGGAGTTTTTGTTGATGTTGATTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871091 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]9978e-106
NP_196059 C2H2-type zinc finger protein [Arabidopsis thaliana]9252e-097
XP_002882674 hypothetical protein ARALYDRAFT_478379 [Arabidopsis lyrata subsp. lyrata]8095e-084
NP_187658 C2H2-type zinc finger protein [Arabidopsis thaliana]8006e-083
XP_002311984 predicted protein [Populus trichocarpa]3723e-033

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q84K31 Putative zinc finger transcription factor9251e-097
Q7G8T1 F18K10.4 protein8004e-083
B9HL72 Predicted protein3722e-033
Q43614 DNA-binding protein3685e-033
P93714 PEThy;ZPT2-63246e-028

Arabidopsis top hits (Blast detail)Scoree value
AT5G04390.1 zinc finger (C2H2 type) family protein9265e-100
AT3G10470.1 zinc finger (C2H2 type) family protein8012e-085
AT2G28200.1 nucleic acid binding / transcription factor/ zinc ion binding2752e-024
AT5G03510.1 zinc finger (C2H2 type) family protein2662e-023
AT2G37430.1 zinc finger (C2H2 type) family protein (ZAT11)1282e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information