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Information for unigene UN33644

FASTA Sequence
Unigene ID: UN33644Length: 1028 SSR 
CGCAGCTATGGAACACTTGACTAACTGAAACATAAATACAAACAATGTAAGATATGCCTATAACAAGAGCTGATGTCACTATAAAA
ACCTAAAACACTGAGAGTACAGTATGGATAAAAATCAAAAATTGGATCGATTCATAATCATACACTTGGCACTTGGAATTATTATC
ACGGAGTCCATCTGGTACCATGGAACTCTAATCGGGGCATGCGAGTATTGTCACCACTTGCTTGGCCCCTTACACCAGCAAAAAGA
TTGTGCATGAAAGCATCAAAGTTGAGATCGATCAAGGGATGGTGGTGTGGAAGCTGATAGAGAGATCTCTGTTCCGATTCCCATCT
ATGACGAGCGTTGATCATCTCGATAAACTCCGCTCTTTCCAACTCATCCCACTTGCGTTTCTCCAAAGGGTCCACTTTCGGAGGTG
TAAAACCCGGATGCTCCTCTTTCAAGTGACTCTTCAGCTGAGAATAGGTCCCAGAGAAACCACACTTGTCCATAGAACAGCACCTG
GGTCTCGCGTTCATGAATCTCCGCGCGGACGTAGACTTCACCGTCCCGTAAACCTCTCCTCTGCAGTAGGGACAGTTAAGGGCCTT
GAGACTGCAGCAGCGGCTTGTGTTGTTGATTCTGCGGTACTGCTTGAAGCAGTTGGAGTGACGGGCGCTCGTGTCGCACATGTAAG
CACGGCATCCTTTGGAGAAGGAAGAGCATTGCAAGAGGATGGCATTGTGTGGCGGCTCCATGCAGATCACACACCTGACGTCCTCC
CATTCGCTCACACTCTCTGACTCCAGAGGTGATGATGACTCGGCGGCTTCTTTCTGTTTCTTGCTCCGACAAGAGCGAAGCGGGTA
AGGCGATACCCTGCCTCTGTTGTTGCTCGAAACCGGCAAAACCCGTCTTTCCTTGAGCATTGCACACTCTGTAGAAGAGGTTCTTT
TGAGAGAGAGAGAGAGAGTCGTAAAGAGTTTCGTAGGAAACGGTGAATATAGGGAGAGAAACAACAGAAGATGCGCGTGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_563977 uncharacterized protein [Arabidopsis thaliana]9922e-105
XP_002890104 F9L1.39 [Arabidopsis lyrata subsp. lyrata]9806e-104
AAD39672 F9L1.39 [Arabidopsis thaliana]9798e-104
XP_002889304 predicted protein [Arabidopsis lyrata subsp. lyrata]5523e-054
NP_178139 uncharacterized protein [Arabidopsis thaliana]5362e-052

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C5E6 Putative uncharacterized protein At1g154309922e-105
Q9XI25 F9L1.399795e-104
Q3E7F0 Uncharacterized protein At1g80220.15361e-052
B4G170 Putative uncharacterized protein4222e-039
B9GWE1 Predicted protein (Fragment)3882e-035

Arabidopsis top hits (Blast detail)Scoree value
AT1G15430.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G80220.1); Has 144 Blast hits to 135 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).9954e-108
AT1G15430.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G80220.1); Has 144 Blast hits to 135 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).9954e-108
AT1G80220.1 zinc ion binding5474e-056
AT2G26050.1 zinc ion binding3753e-036
AT1G77770.1 protein binding / zinc ion binding3413e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information