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Information for unigene UN33658
| FASTA Sequence |
| Unigene ID: UN33658 | Length: 1265 |
SSR | | GGATACGAAGACACGAAGGTCAAAGTTGATATACATCCATCAAATGGGTCCCTAATACTGTAGAGTACCCCCTCTTAAACAAAGTC
AAAGTGCCATGCCGAGAAGACTCCAATTACATACCAACAAAAAACACAAAACGAACTGACTATTATGAAAGAACGTTACTTTTTTG
CTTTTTGGGTTTCTTTGTTTTTAATTCAGCAGTCGAATATCTGACGAACCGCCGCCGTTATCTCATCCGCTGACCCCAAAACGCAC
TCGTCTTCCATCTTGAGGTTGAAAGAATAAGAGACAGATGCATTGCATGGAGATGTAACGTTGAGATGAAGCACAGTGAGCCTAAG
CTTCTCTAGCCAAATGATTGATCTAAGAAGCTGTCCTTGTTTCTTCGGGCATTGTATCTTGAGATTGACGTGACTCTCTATCACCG
TGGCATCTATTCTCAGTTTAGTACTACTTTGCTCTTCGTCACTCGCACGCAGCGAAACGTCTTTGGTATCAGTTTGTTGAGTAATC
TTTTGCGCTTCAAGTGATTGCAACTGTTGCTCGAGGATCTTCACGAAGTCTATAGCTCCTCCTACTATAGACGCTTGGTCTCCCCT
AAGGATGTAGGAAGATGGGATGAGAGAGCGGAGTGAGTTGAGATAAACGTTCATCTGGCGTCTGCGGTTGCGTTCAACCGTAATGT
GCGTCATCCTCTGACTCTCCATCTCTTCCGTGTTCTTTGCTGGTTTGGTTCTCTTTCTCTTTCTCTTCTCTCTGCTCTGATGATGC
TACCAAGTTGTTGTTTCTGCGCTTGCGTTGTGGGTTTAGCTGAATCTCTTCTTGGGTTGAGATCATGGCTTCATTGATTCTTTCAA
GAGATGGGTTCTGATAGTAGTAGTTGGGTGAATGAGACAACTCTGGAACTTCATGTGGGAGATAGTTTCCTAGTCCCCAAGGCGGC
TTCTCTAGTGTCTGAAGAGAGAGTAGTGCTAGAAAGTTTGGGTCTTTGAAGGGCAACACCGCAGCAGAAAGATCTTCACTTTGTTG
CATCATTTGTAAGAGTTGATCTTCTTCCTCAAGTTCAAATATTTGATCCTCTCCTGATCCTTGAACTTCTAAGCTTCTTCTCACAA
TCACTTTCTGATTCAAAGAACAGAGCTTGTTTTGTCCTTGAATCTTCTCCATAAACAAATCTGAGAAACCTCCCCTTATTATCACA
CACTCTTGTTTGTATCTCTCTCTCTCTCTAGAAGTAAATGTGAGGAGTTTTTTAAAGAAGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_182204 transcription factor bHLH70 [Arabidopsis thaliana] | 745 | 1e-076 |
| XP_002880266 hypothetical protein ARALYDRAFT_904152 [Arabidopsis lyrata subsp. lyrata] | 382 | 2e-034 |
| XP_002515085 DNA binding protein, putative [Ricinus communis] | 341 | 1e-029 |
| NP_850735 transcription factor bHLH67 [Arabidopsis thaliana] | 335 | 5e-029 |
| NP_567121 transcription factor bHLH67 [Arabidopsis thaliana] | 335 | 5e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O81037 Transcription factor bHLH70 | 745 | 6e-078 |
| Q700E4 Transcription factor bHLH67 | 335 | 2e-030 |
| Q9M128 Transcription factor bHLH57 | 319 | 2e-028 |
| Q9SK91 Transcription factor bHLH94 | 280 | 5e-024 |
| Q56YJ8 Transcription factor FAMA | 279 | 7e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RNL4 DNA binding protein, putative | 341 | 7e-030 |
| A5C9J3 Putative uncharacterized protein | 333 | 6e-029 |
| B9GRR7 Predicted protein (Fragment) | 315 | 7e-027 |
| B8LLL6 Putative uncharacterized protein | 312 | 2e-026 |
| A2Z276 Putative uncharacterized protein | 302 | 2e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G46810.1 basic helix-loop-helix (bHLH) family protein | 745 | 5e-079 |
| AT3G61950.1 basic helix-loop-helix (bHLH) family protein | 335 | 2e-031 |
| AT3G61950.2 basic helix-loop-helix (bHLH) family protein | 335 | 2e-031 |
| AT4G01460.1 basic helix-loop-helix (bHLH) family protein | 319 | 1e-029 |
| AT1G22490.1 basic helix-loop-helix (bHLH) family protein | 280 | 4e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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