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Information for unigene UN33675

FASTA Sequence
Unigene ID: UN33675Length: 1120 SSR 
AGAGCTTGAGTCTTTTGTTTGCCATCATTATGTTATGGTTTAAGTATTACAAGCTACAACTTCTTGACACAAAAGAGAAATGTAAA
GGATGCTGCTTTAAGTTGAATGAACACAGTTACAAATCCCACTCTAGAGAGACTCTCTCTCTCTCCCACTAACAATGATCATCCAA
CATGATAACCTCCCTTCACTCTCCTACTCCCTACATATATATTACTAAGGCTTGCTTGCACACACGCATGTGCTCTACTACTTTTC
ACGATATTTTCTTCTTGTCAAACTTGCTCCTTACGTACTCTTCTTCTGCTGGGCTTCCTTAGACATGTGGGCCTTTCTTCGTGCAT
ACTGATAAATAATCGGAGGGCGGCAAGCCTCATACGTATCACATTGTGTCATCGACTTTTGCATCAGCTCGTTTGCATCTCTTATG
GCTGAGCTGGCAGCATGCAGCACTATCTTCTTAAGCTCTAGTTTATCCTCGTTAGATCTGTGGTCTTTTGGTAGTCTCCGGAACTC
CTCTGTTAGCCTAAGGCATTCCCCTACACTTTCAGGAGCAACAAAATCTAGTGCCACCTTTATGCAAGACTGTATGTTCCTTACTT
GGTGAGGACAACCTGCAGGGATAAAGACAGCTTCACCGAGGTGTTGCTCAAAGGTCCATGGTTCTATATCAAACTCCTCTTTCAGC
TGTTTCTTCTGTTTTTCATTCAAGAACATACTCTGGTCATGAATTGGATGTGACACAGATTTCACAGGTTCGTTGTAGAGGTGACG
AAACTCATGCTTGTGCCTTTTCAAATACTCAATAAGTTTTGGAACATCCTCCCTTCGAAAAATGTCCCAGACAGCACCACCGTGCA
GAGTCTCTGAACTCTCATCCGCATTGCAATTAGTTTCTACTCGAGCATCCAGTTTCTGCTCCTGTATTGGTTCCACAATTGTACTC
ACAACAGGTTGTAGGGGACTATCCTTTTTCTCCGTCTTCAAACAGACGTCATCATGATTCTCGTCAGCAATTGATTCGTCATTTAC
CGTTACATTCTTCTGAGGAATTAAACTCACATCCACCTTTGGATCATGACCTGACTCCATAGCAGTAGTGCAAGAATACGAACTAG
AA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875004 transcription factor jumonji domain-containing protein [Arabidopsis lyrata subsp. lyrata]8534e-089
NP_192008 Transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana]8122e-084
XP_002263925 PREDICTED: hypothetical protein [Vitis vinifera]6402e-064
CBI40561 unnamed protein product [Vitis vinifera]6402e-064
CAN64660 hypothetical protein VITISV_009615 [Vitis vinifera]6392e-064

Swiss-Prot top hits (Blast detail)Scoree value
Q7LBC6 Lysine-specific demethylase 3B3432e-031
Q6ZPY7 Lysine-specific demethylase 3B3405e-031
Q6IRB8 Lysine-specific demethylase 3A-A3388e-031
Q63679 Lysine-specific demethylase 3A3361e-030
Q9Y4C1 Lysine-specific demethylase 3A3352e-030

TrEMBL top hits (Blast detail)Scoree value
Q8VYB9 Putative uncharacterized protein At4g009908121e-084
Q9SV29 Putative uncharacterized protein AT4g00990 (Fragment)7691e-079
A5AKW0 Putative uncharacterized protein6392e-064
B9RSE9 Transcription factor, putative6373e-064
O04698 Chloroplast DNA-binding protein PD36364e-064

Arabidopsis top hits (Blast detail)Scoree value
AT4G00990.1 transcription factor jumonji (jmjC) domain-containing protein8128e-087
AT1G11950.1 transcription factor5403e-055
AT1G62310.1 transcription factor jumonji (jmjC) domain-containing protein5206e-053
AT3G07610.1 IBM1 (increase in bonsai methylation 1); histone demethylase(H3-K9 specific) / transcription factor5062e-051
AT1G09060.1 transcription factor jumonji (jmjC) domain-containing protein4329e-043

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information