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Information for unigene UN33676
| FASTA Sequence |
| Unigene ID: UN33676 | Length: 653 |
SSR | | GCTTAGAATGAAAATGTGACTCCATTGCAACCAAGGTATTGGAACAAAGCCATAATACGTTATTTACATTATTAAAGAGTTCGAAA
TTAGTAAAAGGTCTAGCTAGAGAGAGGTTGCAGCCTTCACATAACCCTTTTTCTCTTAGAAGGTAAAGTCTCCTTTGGTCTCTGAG
AAAAGAATGTTCTTTTCGTTGATTTGCATAACCCCAGCTTTGAGTTTGCACTCCCACTTGTTCTTTCGCTTCTTCACATAATCGAA
CTGACACATGATCAAATGTGGAATGTCCTCATCGTCATTGATTTCATCTTCCTCATAATCATCATCCTCGTTCAAACTTTCATCAT
CATCATCATGAGGAGCAAAAGCACTTGGCTTTATATCATCAAAAGCACCATCGTGCTGAGGAATGTAAACTCCTTCGTTCTTTATC
GACATCGCAAGCTCCGTGGATGGAAACTGATCATCAGTCTTGTCAATCTCACTCTGATTCTTATCATATCCATGCAAAGGATTCGG
ATCTTGAATCAAAGGTGTTGTTTCTATCGTTCCTCTTATGACTCCGGCTTGTATCATCTTCCTTCTCCAAGTCGCGTGAAGCTCGT
TGAGAACAGACTCATCGAGTTCTCCACTGAAAACGAGGTCGTTTCGAGACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866312 hypothetical protein ARALYDRAFT_496033 [Arabidopsis lyrata subsp. lyrata] | 418 | 4e-039 |
| NP_200731 transcription factor-related protein [Arabidopsis thaliana] | 414 | 1e-038 |
| ABK25179 unknown [Picea sitchensis] | 184 | 5e-012 |
| XP_003002801 conserved hypothetical protein [Verticillium albo-atrum VaMs.102] | 172 | 1e-010 |
| CBX97780 hypothetical protein [Leptosphaeria maculans] | 170 | 2e-010 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q99PM3 Transcription initiation factor IIA subunit 1 | 143 | 1e-008 |
| P52655 Transcription initiation factor IIA subunit 1 | 141 | 2e-008 |
| Q5RCU0 Transcription initiation factor IIA subunit 1 | 141 | 2e-008 |
| O08949 Transcription initiation factor IIA subunit 1 | 141 | 2e-008 |
| Q9USU9 Transcription initiation factor IIA large subunit | 136 | 9e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FIF4 Genomic DNA, chromosome 5, P1 clone:MNC17 | 414 | 8e-039 |
| A9NX18 Putative uncharacterized protein | 184 | 4e-012 |
| C9SQY7 Putative uncharacterized protein | 172 | 9e-011 |
| C5M2I7 Predicted protein | 169 | 2e-010 |
| Q2HDP9 Putative uncharacterized protein | 168 | 3e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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